Query= MSMg01no462_d17.b1 MSMg01no462_d17.b1 CHROMAT_FILE:
MSMg01no462_d17.b1 PHD_FILE: MSMg01no462_d17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:11 2005
(572 letters)
>mm_chr16_92442165_92443139
Length = 975
Score = 1060 bits (548), Expect = 0.0
Identities = 565/572 (98%), Gaps = 3/572 (0%)
Strand = Plus / Minus
Query: 4 ggaattcttaacattctctccacgtgggtcctaaacagcaagccacacatctccccaggg 63
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ggaattcttaacagcctctccacgtgggtcctaaacagcaagccacacatctccccaggg 716
Query: 64 acccaccgctaaaaagcaaatcacgaaatacaattggttattctttcttattggctactt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 acccaccgctaaaaagcaaatcacgaaatacaattggttattctttcttattggctactt 656
Query: 124 atttattgtgacttgatgagaaaccagaccacttctgctgacgccagagctcctgcaaac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 atttattgtgacttgatgagaaaccagaccacttctgctgacgccagagctcctgcaaac 596
Query: 184 ttgctgcagccaaggagatatttcttctcaggtgaaggtgtagaaggttaggggttccct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ttgctgcagccaaggagatatttcttctcaggtgaaggtgtagaaggttaggggttccct 536
Query: 244 cgccaccctccctcaggatggattctttgtggggccatctacaaagccttctccttcctt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cgccaccctccctcaggatggattctttgtggggccatctacaaagccttctccttcctt 476
Query: 304 ttgacccagttctcacagagagacgccactgcgatcagagcgg---cacttggccttgga 360
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 475 ttgacccagttctcacagagagacgccactgcggtcagagcggatgcacttggccttgga 416
Query: 361 tcaaggcttccctttccagctgcatcagtgctgaccgcgtgcgtgcctgggagacgagaa 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 415 tcaaggcttccctttccagctgcatcagtgctgaccgcgtgcgtgcctgggagatgagaa 356
Query: 421 ggtgtccctgggagacgagaaggtgtcctttgctctccttgggctcctccagtacaggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ggtgtccctgggagacgagaaggtgtcctttgctctccttgggctcctccagtacaggtg 296
Query: 481 attgccattcatagcaagagtccgactaccctgtgtctggtgaaggccgtccttgatttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 attgccattcatagcaagagtccgactaccctgtgtctggtgaaggccgtccttgatttc 236
Query: 541 ctactatacagccagcttgcgtgtccagggga 572
||||||||||||||||||||||||||||||||
Sbjct: 235 ctactatacagccagcttgcgtgtccagggga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 975
Length adjustment: 10
Effective length of query: 562
Effective length of database: 965
Effective search space: 542330
Effective search space used: 542330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_d17.g1 MSMg01no462_d17.g1 CHROMAT_FILE:
MSMg01no462_d17.g1 PHD_FILE: MSMg01no462_d17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:11 2005
(488 letters)
>mm_chr16_92300754_92301641
Length = 888
Score = 920 bits (476), Expect = 0.0
Identities = 485/488 (99%)
Strand = Plus / Plus
Query: 1 accccgcaattagtgtcagcaccgggcatccgctcccccctccacagaagagggagatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accccgcaattagtgtcagcaccgggcatccgctcccccctccacagaagagggagatga 260
Query: 61 ggtggaggtctcggtgagaactttgcctctccagagccttggacagggctgctgtctgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtggaggtctcggtgagaactttgcctctccagagccttggacagggctgctgtctgcg 320
Query: 121 tctccccacccggcactttggggattcactggctagaaatgaaactgggaacctaaaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctccccacccggcactttggggattcactggctagaaatgaaactgggaacctaaaatc 380
Query: 181 tgggtatctatcggttatctcaaccgggatgcattcttgttgtctgtccccttggaggaa 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 tgggtatctatcggttatctcaaccgggatgcattcttcttgtctgtccccttggaggaa 440
Query: 241 tgctaagcctggaaaacaaaacaaaaaacctgggacctattgtcttcagctgtatagaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctaagcctggaaaacaaaacaaaaaacctgggacctattgtcttcagctgtatagaac 500
Query: 301 aggagtcaacgaccagtggacatgaacaaagggtcctaggccgaaccctaacccctgcgg 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggagtcaatgaccagtggacatgaacaaagggtcctaggccgaaccctaacccctgcgg 560
Query: 361 accaccctcagggttcctacttggatttctgcagtagcctcagattcctgcgcaactggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 accaccctcagggttcctacttggatttctgcagtagcctcagattcctgcgcaactggc 620
Query: 421 ctgaagcccatagcgcctgcgcttggagcaacacgctccttaatactagcgaatctgcgg 480
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 621 ctgaagcccatagcgcctgcgcttggagaaacacgctccttaatactagcgaatctgcgg 680
Query: 481 gcgcccta 488
||||||||
Sbjct: 681 gcgcccta 688
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space: 419684
Effective search space used: 419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
