Query= MSMg01no464_n16.b1 MSMg01no464_n16.b1 CHROMAT_FILE:
MSMg01no464_n16.b1 PHD_FILE: MSMg01no464_n16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:45 2005
(592 letters)
>mm_chr16_31177426_31178417
Length = 992
Score = 648 bits (335), Expect = 0.0
Identities = 386/407 (94%), Gaps = 9/407 (2%)
Strand = Plus / Minus
Query: 190 aaggacctggtgtggtggcacaggcctttaatcccagcactcgggagtca----tatttg 245
|||||||||||||||||||||| |||||||||||||||| |||||||||| | |
Sbjct: 992 aaggacctggtgtggtggcacacgcctttaatcccagcattcgggagtcagaggca---g 936
Query: 246 ttggatttctgagttcgaggccagcctggtctacaaagtgagttccaggacagccagggc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 gcggatttctgagttcgaggccagcctggtctacaaagtgagttccaggacagccagggc 876
Query: 306 tatacagagaaaccctgtctccaaaacaaacaaacaaacaaacaaacagcaacaacaaca 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 tatacagagaaaccctgtctccaaaacaaacaaacaaacaaacaaacagcaacaacaaca 816
Query: 366 acaaaaaaggaaaggaaaggaaaggtcaaacagccttcccgcctcagtctcagggaagcc 425
|||| || |||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 815 acaacaa--caaaggaaaggaaaggtcaaacagcctccccgcctcagtctcagggaaatc 758
Query: 426 tgtatctgagagccaactgcagtaacagtttcaagtgagtcctggaaagagtatcaaaat 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 tgtatctgagagccaactgcagtaacagtttcaagtgagtcctggaaagagtatcaaaat 698
Query: 486 gccttaaaaaaagagaagaatccagcgatcttctttgtcctgggataaacattgtaacaa 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 gccttaaaaaaagagaagaatccagcgatcttctttgtcctgggataaacattgtaacaa 638
Query: 546 aaatctttccagatggttcatcactgaacttatttgcatattttaat 592
||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 637 aaatctttccagatggttcatcactgaacacatttgcatattttaat 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no464_n16.g1 MSMg01no464_n16.g1 CHROMAT_FILE:
MSMg01no464_n16.g1 PHD_FILE: MSMg01no464_n16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:45 2005
(296 letters)
>mm_chr16_31004291_31004986
Length = 696
Score = 557 bits (288), Expect = e-163
Identities = 294/296 (99%)
Strand = Plus / Plus
Query: 1 tccacaagcctgagacatttcacgactcacaatagaggggaagccaccataaaaaggact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccacaagcctgagacatttcacgactcacaatagaggggaagccaccataaaaaggact 260
Query: 61 tgctgtgtgccctttgaagtacagtgactgtgggacaagtgactataaagcttacacagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctgtgtgccctttgaagtacagtgactgtgggacaagtgactataaagcttacacagc 320
Query: 121 tgggggctggagcctactcctgctcagtgaatttccagacccaagtatgcttgcgtccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgggggctggagcctactcctgctcagtgaatttccagacccaagtatgcttgcgtccct 380
Query: 181 agtcacagtacacctgagccacagcttttgttatctgattctttcttctcatggatgcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtcacagtacacctgagccacagcttttgttatctgattctttcttctcatggatgcta 440
Query: 241 tcagattccacttataacaagttacctgtccatgccacattgggacacttggagag 296
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 tcagattccacttataacaagttacctgtccatgccacatcaggacacttggagag 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
