Query= MSMg01no464_p17.b1 MSMg01no464_p17.b1 CHROMAT_FILE:
MSMg01no464_p17.b1 PHD_FILE: MSMg01no464_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:54 2005
(246 letters)
>mm_chr16_75702026_75702672
Length = 647
Score = 462 bits (239), Expect = e-135
Identities = 245/247 (99%), Gaps = 1/247 (0%)
Strand = Plus / Plus
Query: 1 aacaaccagtattttaccaaattaatggcactaaattgcattctttcttatagagggtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacaaccagtattttaccaaattaatggcactaaattgcattctttcttatagagggtga 260
Query: 61 gctgcgtgattgtttctagaattaaaaagagtcatgcctaaaattcatacatgagccatc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actgcgtgattgtttctagaattaaaaagagtcatgcctaaaattcatacatgagccatc 320
Query: 121 aaaaatctaaatacaaatccttttacataatatgcctgaaagctgaatgtttaggaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaatctaaatacaaatccttttacataatatgcctgaaagctgaatgtttaggaattt 380
Query: 181 gtgcattgtaacttagggataaaga-tatacctagctttggagcatttgtcttacaaaca 239
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgcattgtaacttagggataaagaatatacctagctttggagcatttgtcttacaaaca 440
Query: 240 aatttac 246
|||||||
Sbjct: 441 aatttac 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 647
Length adjustment: 9
Effective length of query: 237
Effective length of database: 638
Effective search space: 151206
Effective search space used: 151206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no464_p17.g1 MSMg01no464_p17.g1 CHROMAT_FILE:
MSMg01no464_p17.g1 PHD_FILE: MSMg01no464_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:55 2005
(571 letters)
>mm_chr16_75901513_75902483
Length = 971
Score = 1054 bits (545), Expect = 0.0
Identities = 565/573 (98%), Gaps = 4/573 (0%)
Strand = Plus / Minus
Query: 1 taactcattcaattaactgttaaaatgattaaaattattagctgtttttaatgaagaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 taactcattcaattaactgttaaaatgattaaaattattagctgtttttaatgaagaata 712
Query: 61 ttctttccagcaaatcactaacttgttttagattttcccatcttatagaatgtaaatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ttctttccagcaaatcactaacttgttttagattttcccatcttatagaatgtaaatcca 652
Query: 121 aaaccaaaatttaatctcaagcaagtagaaaaactttggtgccaaatatattgccaatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aaaccaaaatttaatctcaagcaagtagaaaaactttggtgccaaatatattgccaatat 592
Query: 181 ttagaaagtactaagtcagcatgcagaaaaatccaaagatagtgactgaagagaatgtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ttagaaagtactaagtcagcatgcagaaaaatccaaagatagtgactgaagagaatgtgg 532
Query: 241 cttcttctct--gtataacattgaatattttatatcctataggaagaatgaagagacact 298
|||| | || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 cttc--cccttggtataacattgaatattttatatcctataggaagaatgaagagacact 474
Query: 299 acccggactactaacacactttgtcttttaaaactcgacttacttaaccatttgtctctt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 acccggactactaacacactttgtcttttaaaactcgacttacttaaccatttgtctctt 414
Query: 359 gtctttccctgatttagagaaaaaaatgacttcattatccacagggaatgtattttcaaa 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gtctttccctgatttagagaaaaaaatgacttcattatccacagggaatgtattttcaaa 354
Query: 419 caatggaaccaagtgcataaacaatatatctaaatttccagatcatatctcgtcaaagtg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 caatggaaccaagtgcataaacaatatatctaaatttccagatcatatctcgtcaaagtg 294
Query: 479 atgcatttctccttatttgctaatattaagaattcaagtggagttttagaaataatccat 538
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 293 aggcatttctccttatttgctaatattaagaattcaagtggagttttagaaataacccat 234
Query: 539 tcacattcagttcttaagagaaaaaaaaagcca 571
|||||||||||||||| ||||||||||||||||
Sbjct: 233 tcacattcagttcttaggagaaaaaaaaagcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
