TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCAATTAATAACACATTTTCCCCACTTCCGGGGGGAACAACAATCTCTAT
ATTATTAAATATACACTATGATGATATGTTATAGATACATGGCTAAAATG
ATGACTTTAAAATACATGACTGTGTTAAAGTTAGGGGTGGGTTATCTAGA
CTGGTCTTCCACAGAGAATTTTAAAATGAGTATATCTTTTTTCTTTAATG
CAGTGAACACCCCTACTAATTTAAGGCAAACAAAGGAGAGGAACTTTGCT
TGTTAATGTAGAACCAGTAAGCTCTGCCTTAGAAATATTATGAAAGAACA
ATTGAGAACTTCAACTGAGCAGTAAATAAAATAATTTGACCCCCAGAAAT
TGAGTAGATTGGCTTCAATATTTGTGTTCCCACTTGCTTGTTAATATAGA
GAAAAGATCTCAGAGGCAAAAGTAAATAAGAAGCCATCAGTTTCATTGTC
ACTGTGTCCACATGTGTGATGTAAAAAACGAACTTGAGAATTCATCTCTT
TAAATTCTGTAGGATCTATTACATTTCACATTTTTCAAGATGTCAGCCCT
TAGTCCTTTGGCTTGCCAGATTCTGGGACTGGGGTGAGCAAATTATAAAG
GTGGATGTATGTGGAACAATCCACCCTCCTCCTGGCAAAACGGATGCTCA
AAAAGGGACAAATCTCCGCTGAATTAACCCCTTTAAACACCCCCC

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXAAGGAAAGATTGAGGGAACTGGAGGGGCCA
AGGAAACAAGAATATCTACATAGGTGACTAACCTGGACTCATGGGAGCTC
AGAGACAGAATCACAAACCAAAGAACATTCGTGGACTGACCTAGGTCCAC
TACATGTATCTAGCAAATGGGCAGCAGGATGTCCATGGGAGTCCCCTATC
AAATGAAGTGAAGGCTGACTGACTCTGTAGCTTCCTCCCATTGGATCCCT
TTTTCCTAGGTAGGCTGCTTTGTCTGGCTTCAGTGGGACAGAATACACTT
TGTCCTGCTTTGACTTGATGTGCCAGTAAGGGATGGTACCCATGTGGGAC
TTCCCTTCACAGAGGAGAAGGGGAAAAGGGAATGGAGCAAGGGGGTATGA
AGGTGAGACTTGGAGAAGGTGATGAAGCCTGGTCTGAAATTGCGACGCAC
AGTGTATACTTTCACGACGCGGAACCTGGTCATTGCTATTTTCCTATACT
GATTTTTCTTTTTTCCCCCCTCGCCCCCCCCTATTCATTTCCGCCCCTTC
TTTTTCCTCGTTCCTCATCTCTTTAACATTAACCCCCTTTACCAATCACT
TTTCCTTTCTCTCTCTTCTTTTCTTTCCCCTTCCTGCTTGCCATGTCCCC
TTTCTTTCCCTTTCTTTCCCGCTATTTCTATACCTATCTTCCGTATGTAC
C

Query= MSMg01no465_j04.b1 MSMg01no465_j04.b1 CHROMAT_FILE:
MSMg01no465_j04.b1 PHD_FILE: MSMg01no465_j04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:43 2005
         (537 letters)



>mm_chr16_65595102_65596037
          Length = 936

 Score =  911 bits (471), Expect = 0.0
 Identities = 511/531 (96%), Gaps = 13/531 (2%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcaattaataacacattttccccacttccggggggaacaacaatctctatattat 63
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaattaataa-acattttccccacttccggggggaacaacaatctctatattat 262

                                                                       
Query: 64  taaatatacactatgatgatatgttatagatacatggctaaaatgatgactttaaaatac 123
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 taaacatacactatgatgatatgttatagatacatggctaaaatgatgactttaaaatac 322

                                                                       
Query: 124 atgactgtgttaaagttaggggtgggttatctagactggtcttccacagagaattttaaa 183
           |||||||||||||||||||           |||||||||||||||| |||||||||||||
Sbjct: 323 atgactgtgttaaagttag-----------ctagactggtcttccatagagaattttaaa 371

                                                                       
Query: 184 atgagtatatcttttttctttaatgcagtgaacacccctactaatttaaggcaaacaaag 243
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 372 atgagtatatcttttttctttaatgcagtgaacacccctaccaatttaaggcaaacaaag 431

                                                                       
Query: 244 gagaggaactttgcttgttaatgtagaaccagtaagctctgccttagaaatattatgaaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 432 gagaggaactttgcttgttaatgtagaaccagtaagctctgccttagaaatgttatgaaa 491

                                                                       
Query: 304 gaacaattgagaacttcaactgagcagtaaataaaataatttgacccccagaaattgagt 363
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gaacaattgagaacttcaattgagcagtaaataaaataatttgacccccagaaattgagt 551

                                                                       
Query: 364 agattggcttcaatatttgtgttcccacttgcttgttaatatagagaaaa-gatctcaga 422
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 552 agattggcttcaatatttgtgttcccacttgcttgttaatatagagaaaaagatctcaga 611

                                                                       
Query: 423 ggcaaaagtaaataagaagccatcagtttcattgtcactgtgtccacatgtgtgatgtaa 482
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 612 ggcaaaagtaaataagaagccatcagtttcattgtcactgtgtccacatgtgtgatataa 671

                                                              
Query: 483 aaaacgaacttgagaattcatctctttaaattctgtaggatctattacatt 533
           |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 672 aaaacgaacttgagaactcatctctttaaattctgtaggatctattacatt 722


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 936
Length adjustment: 10
Effective length of query: 527
Effective length of database: 926
Effective search space:   488002
Effective search space used:   488002
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)