Query= MSMg01no465_k16.b1 MSMg01no465_k16.b1 CHROMAT_FILE:
MSMg01no465_k16.b1 PHD_FILE: MSMg01no465_k16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:52 2005
(333 letters)
>mm_chr16_8324932_8325664
Length = 733
Score = 534 bits (276), Expect = e-156
Identities = 300/308 (97%)
Strand = Plus / Minus
Query: 1 gctctttgagaagtgaacctacaatgtcagtgtagtaaatgcctgtacttcttaccaagt 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 342 gctctttgggaagtgaacctacaatgtcagtgtagtaaatgcctgtacttcttacgaagt 283
Query: 61 atttctacacattgttcttctagacaaacatcagtctttaagcattggccctggggcttg 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 atttctacacgttgttcttctagacaaacatcagtctttaagcattggccctggggcttg 223
Query: 121 ttttggccacagtcaagtgagagcacagatggagtcttttgtagctcaagctggcctcaa 180
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 222 ttttgaccacagtcaagtgagatcacagatggagtcttttgtagctcaagctggcctcaa 163
Query: 181 gctcactaagtagctcaggatgaccttgaacttcggagccttcaacctccacctcctaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 gctcactaagtagctcaggatgaccttgaacttcggagccttcaacctccacctcctaag 103
Query: 241 tgctgatattatagatgtaggccatcacattatttattattattattattattattatta 300
|||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 tgctgagagtacagatgtaggccatcacattatttattattattattattattattatta 43
Query: 301 ttattatt 308
||||||||
Sbjct: 42 ttattatt 35
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no465_k16.g1 MSMg01no465_k16.g1 CHROMAT_FILE:
MSMg01no465_k16.g1 PHD_FILE: MSMg01no465_k16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:52 2005
(296 letters)
>mm_chr16_8172979_8173674
Length = 696
Score = 520 bits (269), Expect = e-152
Identities = 287/293 (97%)
Strand = Plus / Plus
Query: 4 gaattccatcactaggggattcacatttatcttgcatctttcaggaatttttttgaaaat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattccatcactaggggattcacatttatcttgcatctttcaggaatttttttgaaaat 263
Query: 64 gaaaaaaaggccatgggccctgaggatgggagaagtggaaacatgaaacctcagtttgct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gaaaaaaaggccatgggccctgaggatgggagaagtggaaacatgaaacctcagtttgct 323
Query: 124 tttttatggcttttgccctcaaaagttctacttcttggtggcttgtgtctctagcagtac 183
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 324 tttttatggcttttgccctcaaaagttccacttcttggtggcttgtgtctttagcagtac 383
Query: 184 atttctgtttcacagaaacctagttgttctcctcccatgcagtgagtttttctgtaccta 243
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 384 atttctgtttcacagaaacctagttgttcccctcccatgcagtgagtttttctgtaccta 443
Query: 244 ttataccacttataagctgaggtacactgctcttaccccctccaatcaataat 296
||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttataccacagagaagctgaggtacactgctcttaccccctccaatcaataat 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
