Query= MSMg01no466_h07.b1 MSMg01no466_h07.b1 CHROMAT_FILE:
MSMg01no466_h07.b1 PHD_FILE: MSMg01no466_h07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:57 2005
(434 letters)
>mm_chr16_39138082_39138917
Length = 836
Score = 832 bits (430), Expect = 0.0
Identities = 434/436 (99%), Gaps = 2/436 (0%)
Strand = Plus / Minus
Query: 1 taatttgtgtaagtattgttccttaacagtgttatattttcgctcttgtactatcagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 taatttgtgtaagtattgttccttaacagtgttatattttcgctcttgtactatcagaga 577
Query: 61 ctgtgtggacaagtatcagtttgttttgccaaggagattatgactgtgtgaattacaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ctgtgtggacaagtatcagtttgttttgccaaggagattatgactgtgtgaattacaata 517
Query: 121 catcttgcaaactaaaatacgttgaagttcaataaaattctcacccatgggtctcacttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 catcttgcaaactaaaatacgttgaagttcaataaaattctcacccatgggtctcacttt 457
Query: 181 ttcatttctgccatcaaaataccaatacctcattagctgtgaacaaacattggaaatgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ttcatttctgccatcaaaataccaatacctcattagctgtgaacaaacattggaaatgtg 397
Query: 241 ctaattcatttaataaatgcatggaaagagcaaag--acacacacacacaaagaaaacga 298
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 396 ctaattcatttaataaatgcatggaaagagcaaagacacacacacacacaaagaaaacga 337
Query: 299 agcagtcagaagtaggcgatgctagtaacaaaggatcaatttgatgaattcttcaggaag 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 agcagtcagaagtaggcgatgctagtaacaaaggatcaatttgatgaattcttcaggaag 277
Query: 359 ggcttcaggcttgataagtaatttattgcagcagaaaagaaggtaccatctggtgagaag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ggcttcaggcttgataagtaatttattgcagcagaaaagaaggtaccatctggtgagaag 217
Query: 419 atcaaagaacctcaga 434
||||||||||||||||
Sbjct: 216 atcaaagaacctcaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 836
Length adjustment: 9
Effective length of query: 425
Effective length of database: 827
Effective search space: 351475
Effective search space used: 351475
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no466_h07.g1 MSMg01no466_h07.g1 CHROMAT_FILE:
MSMg01no466_h07.g1 PHD_FILE: MSMg01no466_h07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:57 2005
(234 letters)
>mm_chr16_38982338_38982971
Length = 634
Score = 453 bits (234), Expect = e-132
Identities = 234/234 (100%)
Strand = Plus / Plus
Query: 1 attgtattcagaagttaagtgcaaaaactaaaattagaaaagagacattaaaaggcaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgtattcagaagttaagtgcaaaaactaaaattagaaaagagacattaaaaggcaaat 260
Query: 61 gttagcaggaaatagataaatctaacccccttgcatatttatagtgtaaatgcatttgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttagcaggaaatagataaatctaacccccttgcatatttatagtgtaaatgcatttgac 320
Query: 121 acacacctttttctattatttatttattattactttttttttaaatctttccacccattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacacctttttctattatttatttattattactttttttttaaatctttccacccattt 380
Query: 181 cttgcctctgtggttggttctgtggtagctcgggtgaaggttataagaaaggag 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgcctctgtggttggttctgtggtagctcgggtgaaggttataagaaaggag 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
