Query= MSMg01no467_e07.b1 MSMg01no467_e07.b1 CHROMAT_FILE:
MSMg01no467_e07.b1 PHD_FILE: MSMg01no467_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:05 2005
(141 letters)
>mm_chr16_51876747_51877287
Length = 541
Score = 234 bits (121), Expect = 2e-66
Identities = 133/137 (97%), Gaps = 2/137 (1%)
Strand = Plus / Minus
Query: 1 ggaatgatatgatatccccacaattttcatttcactaaaggacattttaagcatcctgaa 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 336 ggaatgatatgatatccccacaattttcatttcactaaaggtcattttaagcatcctgaa 277
Query: 61 gttaaagactgcctttggtacttcctttctg-gggcacaccttgaagtcaagagctgctg 119
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Sbjct: 276 gttaaagactgcctttggtacttcctttctgtggg-acaccttgaagtcaagtgctgctg 218
Query: 120 aagacttgctttgactg 136
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Sbjct: 217 aagacttgctttgactg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 141
Length of database: 541
Length adjustment: 8
Effective length of query: 133
Effective length of database: 533
Effective search space: 70889
Effective search space used: 70889
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no467_e07.g1 MSMg01no467_e07.g1 CHROMAT_FILE:
MSMg01no467_e07.g1 PHD_FILE: MSMg01no467_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:05 2005
(105 letters)
>mm_chr16_51840665_51841169
Length = 505
Score = 174 bits (90), Expect = 1e-48
Identities = 102/106 (96%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 1 tgcttgtatttcct-gatatcttccacctccactcttcctctagatgaggaatacaccat 59
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Sbjct: 201 tgcttgtattt-ctcgttatcttccacctccattcttcctctagatgaggaatacaccat 259
Query: 60 gcagaagagaccctccacttcaaagataaagctgtagcaatccacc 105
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gcagaagagaccctccacttcaaagataaagctgtagcaatccacc 305
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 105
Length of database: 505
Length adjustment: 8
Effective length of query: 97
Effective length of database: 497
Effective search space: 48209
Effective search space used: 48209
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
