Query= MSMg01no467_g01.b1 MSMg01no467_g01.b1 CHROMAT_FILE:
MSMg01no467_g01.b1 PHD_FILE: MSMg01no467_g01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:13 2005
(407 letters)
>mm_chr16_30818158_30818964
Length = 807
Score = 764 bits (395), Expect = 0.0
Identities = 404/407 (99%)
Strand = Plus / Minus
Query: 1 ggaagtctcatgagacacaagagatttgtgatgttcactggcaccagagcgtttgagact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ggaagtctcatgagacacaagagatttgtgatgttcactggcaccagagcgtttgagact 548
Query: 61 tgggacaagttttctaagacacgatatttattccaaagaatttgacctcagccttagctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tgggacaagttttctaagacacgatatttattccaaagaatttgacctcagccttagctg 488
Query: 121 tttatcccaagtgtaagaggcctcagaaaacaacagcaccaccttatcctcatgaggatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tttatcccaagtgtaagaggcctcagaaaacaacagcaccaccttatcctcatgaggatg 428
Query: 181 cgcagtggactcagagtgtgtgtgacccagcccactgcttgctttcatcaatattttgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 cgcagtggactcagagtgtgtgtgacccagcccactgcttgctttcatcaatattttgtt 368
Query: 241 gtaaaactttcttctccaaagaaaaacttcaagaagtccgctatgtgcacttacactgtg 300
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gtaaaactttcaactccaaagaaaaacttcaagaagtccgctatgtgcacttacactgtg 308
Query: 301 tgctttgctctgtatatggaacacatcaatccaggaatgaagaccacgggccaagcagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tgctttgctctgtatatggaacacatcaatccaggaatgaagaccacgggccaagcagat 248
Query: 361 ggtacaagacctgagttggatcagagtccacattaagagagagaggg 407
|||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 247 ggtacaagacctgagttggatcagagcccacattaagagagagaggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no467_g01.g1 MSMg01no467_g01.g1 CHROMAT_FILE:
MSMg01no467_g01.g1 PHD_FILE: MSMg01no467_g01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:13 2005
(236 letters)
>mm_chr16_30641907_30642542
Length = 636
Score = 414 bits (214), Expect = e-120
Identities = 229/236 (97%), Gaps = 4/236 (1%)
Strand = Plus / Plus
Query: 1 aatggcctcctctggcttctaagggcaccaggcatgcacatggtgtatatacatatatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatggcctcctctggcttctaagggcaccaggcatgcacatggtgtatatacatatatac 260
Query: 61 atgtaggcaaaacactcagacacataaaataataataattaaagaaaatctgaaataacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtaggcaaaacactcagacacataaaataataataattaaagaaaatctgaaataacg 320
Query: 121 tgtaaaagttcccctggaggctggagagatagctcatgtgttaagagcttagcggaaagc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 321 tgtaaaagttcccctggaggctggagagatagctcatgtgttaagagcttagtggaaggc 380
Query: 181 attgctgaaattggtaaagtgctggcctttaatcccagtactcagcaggcagaagc 236
||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 381 attgctgaaattggtaaagtgctgg----taatcccagcactcagcaggcagaagc 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
