Query= MSMg01no467_o10.b1 MSMg01no467_o10.b1 CHROMAT_FILE:
MSMg01no467_o10.b1 PHD_FILE: MSMg01no467_o10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:54 2005
(242 letters)
>mm_chr16_46952160_46952802
Length = 643
Score = 431 bits (223), Expect = e-125
Identities = 238/243 (97%), Gaps = 1/243 (0%)
Strand = Plus / Minus
Query: 1 ttcactgacgttaagtaaattattaattttcttctttggttatgagttttcactaaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttcactgacgttaagtaaattattaattttcttctttggttatgagttttcactaaagga 384
Query: 61 aataattcactaagctcttatatcattttcagtgcttataaatagagaat-aaaaacact 119
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 383 aataattcactaagctcttatatcattttgagtgcttataaatagagaataaaaaacact 324
Query: 120 attgtcacaccatgggaatcatttccataacgaagtttaaaatgaacaagctgagttatt 179
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 323 attgtctcaccatgggaatcatttccataacgaagttcaaaatgaacaagctgagttatt 264
Query: 180 attcatttattttcatagatcacatgaagaaggaaaaataaccattttaggcacaggcta 239
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 263 attcatttattttcatagatcacatgaagaaggaaaaaaaaccattttaggcacaggcta 204
Query: 240 gca 242
|||
Sbjct: 203 gca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 643
Length adjustment: 9
Effective length of query: 233
Effective length of database: 634
Effective search space: 147722
Effective search space used: 147722
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no467_o10.g1 MSMg01no467_o10.g1 CHROMAT_FILE:
MSMg01no467_o10.g1 PHD_FILE: MSMg01no467_o10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:54 2005
(372 letters)
>mm_chr16_46825159_46825930
Length = 772
Score = 642 bits (332), Expect = 0.0
Identities = 347/352 (98%)
Strand = Plus / Plus
Query: 1 tcatcttcccctagtttcatgttatgtggttcttagttcacttgaattgctgagcaggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatcttcccctagtttcatgttatgtggttcttagttcacttgaattgctgagcaggtg 260
Query: 61 cagcaacctgcaggtctcaggcagctgtgactccaccgaggtaagcaaacagccccgcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagcaacctgcaggtctcaggcagctgtgactccaccgaggtaagcaaacagccccgcac 320
Query: 121 tgcactgtgttgcataagacgtactttctgttttaatcaaagttcatttttcctaacttg 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcactgtgttgcataagatgtactttctgttttaatcaaagttcatttttcctaacttg 380
Query: 181 cattatctgcagtttggcttcttttgtttttgttttgtttttttcagggtctcatacttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cattatctgcagtttggcttcttttgtttttgttttgtttttttcagggtctcatacttc 440
Query: 241 ttattatgagcttcacaccaagccttccactttgtaggagaaagagagaaagaaaggaaa 300
| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaataagagcttcacaccaagccttccactttgtaggagaaagagagaaagaaaggaaa 500
Query: 301 atgaaggagagagagagagagagagagagagagagagagagagagagagaga 352
||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgaaggggagagagagagagagagagagagagagagagagagagagagaga 552
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 26
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
