Query= MSMg01no468_o23.b1 MSMg01no468_o23.b1 CHROMAT_FILE:
MSMg01no468_o23.b1 PHD_FILE: MSMg01no468_o23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:20 2005
(446 letters)
>mm_chr16_42260345_42261190
Length = 846
Score = 772 bits (399), Expect = 0.0
Identities = 434/449 (96%), Gaps = 6/449 (1%)
Strand = Plus / Minus
Query: 4 gaattctataaacattcccgaatgaaggaagtttctttttcttaaaattgtctatgataa 63
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 gaattctacaaacatgaccgaatgaaggaagtttctttttcttaaaattgtctatgataa 665
Query: 64 cctgaaaattct------aaaaaaaaaaaaaatctagaaaaaaatccctattcgctgtgt 117
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 cctgaaaattctaaaaaaaaaaaaaaaaaaaatctagaaaaaaatccctattcgctgtgt 605
Query: 118 aacttgttcattaggtgcaagattcactacccagcttgatataagtggcagtttagatcc 177
||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 604 aacttgtccattgggtgcaagattcactacccaacttgatataagtggcagtttagatcc 545
Query: 178 tgcttatttaaaatacattcatgttttctacacacagagctaagcaaaccccagacctgc 237
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tgcttatttaatatacattcatgttttctacacacagagctaagcaaaccccagacctgc 485
Query: 238 cattgccattgaaatcaaccagtatgaagttttggttggaagtagatttcctttgtatgt 297
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 484 cattgccattgaaatcaaccagtatgaagtttcggttggaagtagatttcctttgtatgt 425
Query: 298 aagatgaagatgtagcagaaatgttgtacattcccggtcatgagccttcaattcactctt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aagatgaagatgtagcagaaatgttgtacattcccggtcatgagccttcaattcactctt 365
Query: 358 atcctgccgacctctgacattctgttttgctgacctattatttggccagttcttcatctt 417
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 atcctgccgacctctaacattctgttttgctgacctattatttggccagttcttcatctt 305
Query: 418 tggctttaaaatcatttctagactttggc 446
|||||||||||||||||||||||||||||
Sbjct: 304 tggctttaaaatcatttctagactttggc 276
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no468_o23.g1 MSMg01no468_o23.g1 CHROMAT_FILE:
MSMg01no468_o23.g1 PHD_FILE: MSMg01no468_o23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:20 2005
(456 letters)
>mm_chr16_42157848_42158703
Length = 856
Score = 851 bits (440), Expect = 0.0
Identities = 452/456 (99%)
Strand = Plus / Plus
Query: 1 caatttaggacgttcatatgtgccagatgtatgaggggagtcagccgatgactcactagg 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 caatttaggacgttcatatgtgccagatgtatgaggggagtcagccgacgactcactagg 260
Query: 61 actctgctgagaattgtcagcttctatctaccacaaatcaggggaggagagaccttacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actctgctgagaattgtcagcttctatctaccacaaatcaggggaggagagaccttacaa 320
Query: 121 gccattcatcatgctttctaattggacactggggagccaagactgccatagtgtactatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 gccattcatcatgctttctaattggacactggggagccaagactgccatagtgtactctc 380
Query: 181 ccgttctttttcattgacactagaagaaaacacttcccacacgtcggtgacatgtgtata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccgttctttttcattgacactagaagaaaacacttcccacacgtcggtgacatgtgtata 440
Query: 241 cacttgacacctacatatgacgaccagtgtggtatattgactataattcacaggaccgtt 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacttgagacctacatatgacgaccagtgtggtatattgactataattcacaggaccgtt 500
Query: 301 tcttgcttatcggcacaccttagagaccttgcatttccagcatgacttctgcaacctccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcttgcttatcggcacaccttagagaccttgcatttccagcatgacttctgcaacctccc 560
Query: 361 aagaaccgctggggcaagcatagcatcctcttaaagataccattgcctgagctgctcatt 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 aagaaccgctggggcaagcatagcatcctcttaaagataacattgcctgagctgctcatt 620
Query: 421 ctagccatcccatatgctatagctcacacagctcca 456
||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctagccatcccatatgctatagctcacacagctcca 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
