CCGTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAAACAAGTGCG
CGGAATCTCATTTTTTCAAAATAATCAAGCCAAAATAAATTAAGCTACCC
CAGAGTGCTTTAAGTCTATAGAAGTAATTAATCATCTAGTACTTTAGTTT
CCATTTCTTAATTAATTATTGAATTTGACCTCTTATCCACAAATTGAAAT
CCAGAAACTTCTTTTGTCACATAGTACTATTTTCTTTACCAGTCTGAGCC
TCTTCTTGAAAGAGTGCTGGGATTATCTTCAGCAACCCTGTACATGCTGA
GTCGTTACAATGGCTTCTGATACTGGATACATCTAACATCCAGAGGAATA
ACTATTCTTACACCGAACTCATATGCATATAAAGATGTCGTGTAGGCTTT
TCCTAAGATGTTCCTTGAATAACATTCTTTGCTTTGTCAGTGCGTTAAAC
TATTAAATGAATTAAGAACTATCAAAAGGACTGAATAGAGAGAATTGTTT
ATTGATTACAATAGTGAGTGAAAGTTCACATTTACCATGATAACTTCTAT
GATGATTCAGGGCTCACTTACATTTACAGGTGTGACATTTTGCCCCATAT
TACCCTCGTACGTTTACTATAAATTGTTCCAGAACTTTGATCTGCCCCTT
TAAGCATTAGGCCTTTTTGTTCTTATCAGGCTTAACAATCCCATATGTCG
AACTTTTTGCTTTTAAGCCACATTTTTTTCTTTGTTTCTTACACCCCCTT
TCAATACTTTAATCGCA

CACGATGATGTGNGAGGCCTGGAGGCCGCCTGGTTCTCAAATTTAGGTGA
ACTATAGAAGTTTCGCGAAATTCTCTGGGAAGGGATCACATTTTGTTTAG
TACACAGGTGTTAAGAACACAGTGTAATTTTGTAAAGAAACATTGAATAC
ATGGTTTAAATAAAGCATAAAATTTGATTTCATAAGAAATTTCCACTGGC
AACCAGATGTCAAACAAACATCTATATCTAAAATGTCTGAAATTATGTTG
ACATTGAATGACACAAGCATTATTTTTTCACCAGTTAAATGGACATTGAG
AAAAATGACCAAAGGAAATCNATANTTCAAAATTTAAGGAGAGAGCTATG
TTATTTTATCATATAAATGAATAGTTTTAGGTGAATAATTAAAAACCTCT
TTAAACTTTGTATTTTTAAGTAGAACTAACTATACTTAATCAATATCTTC
ATACAGAAGTCTGTCATGATTTTTGACATGCCCTAGATACACTTTTCAGC
TAGCACACGTCTTTACAGATATCTGAAAAAGATTTCTTCTATTCTCAATA
GAATAGATGCCCCTCGAAGAATAATTCCTCAGTCGTTGTCTACTAGATGA
TCCCAAAATATTCAAGATTATCTTCAATGCCCGATAATCCGGAGATTGAT
TGCACCGATTGCTTCTAACATTTCTTTTCACAGCTTCTTACTAAAGAAAA
TCTCTTAGGTGGGCCTATTATTCCATCCGATATTTTACTCGCATAACCCC
TTCTTTAAACTATCTTTTTTTCCTTCCTGGTGTTAN

Query= MSMg01no469_l06.b1 MSMg01no469_l06.b1 CHROMAT_FILE:
MSMg01no469_l06.b1 PHD_FILE: MSMg01no469_l06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:22 2005
         (174 letters)



>mm_chr16_82452316_82452889
          Length = 574

 Score =  321 bits (166), Expect = 1e-92
 Identities = 172/174 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   acatctaacatccagaggaataactattcttacaccgaactcatatgcatataaagatgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 acatctaacatccagaggaataactattcttacaccgaactcatatgcatataaagatgt 315

                                                                       
Query: 61  cgtgtaggcttttcctaagatgttccttgaataacattctttgctttgtcagtgcgttaa 120
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 314 cgtgtaggcttttcctaagatgttccttgaataacattccttgctttgtcagtgcattaa 255

                                                                 
Query: 121 actattaaatgaattaagaactatcaaaaggactgaatagagagaattgtttat 174
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 actattaaatgaattaagaactatcaaaaggactgaatagagagaattgtttat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 574
Length adjustment: 8
Effective length of query: 166
Effective length of database: 566
Effective search space:    93956
Effective search space used:    93956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no469_l06.g1 MSMg01no469_l06.g1 CHROMAT_FILE:
MSMg01no469_l06.g1 PHD_FILE: MSMg01no469_l06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:22 2005
         (474 letters)



>mm_chr16_82315373_82316246
          Length = 874

 Score =  866 bits (448), Expect = 0.0
 Identities = 467/474 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   aattctctgggaagggatcacattttgtttagtacacaggtgttaagaacacagtgtaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattctctgggaagggatcacattttgtttagtacacaggtgttaagaacacagtgtaat 260

                                                                       
Query: 61  tttgtaaagaaacattgaatacatggtttaaataaagcataaaatttgatttcataagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgtaaagaaacattgaatacatggtttaaataaagcataaaatttgatttcataagaa 320

                                                                       
Query: 121 atttccactggcaaccagatgtcaaacaaacatctatatctaaaatgtctgaaattatgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttccactggcaaccagatgtcaaacaaacatctatatctaaaatgtctgaaattatgt 380

                                                                       
Query: 181 tgacattgaatgacacaagcattattttttcaccagttaaatggacattgagaaaaatga 240
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 tgacattgaatgacacaagcattattttttcatcagttaaatggacattgagaaaaatga 440

                                                                       
Query: 241 ccaaaggaaatcnatanttcaaaatttaaggagagagctatgttattttatcatataaat 300
           |||||||||||| | | |||||||||||||| ||||| ||||||||||||||| ||||||
Sbjct: 441 ccaaaggaaatctacatttcaaaatttaaggggagagttatgttattttatcagataaat 500

                                                                       
Query: 301 gaatagttttaggtgaataattaaaaacctctttaaactttgtatttttaagtagaacta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaatagttttaggtgaataattaaaaacctctttaaactttgtatttttaagtagaacta 560

                                                                       
Query: 361 actatacttaatcaatatcttcatacagaagtctgtcatgatttttgacatgccctagat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actatacttaatcaatatcttcatacagaagtctgtcatgatttttgacatgccctagat 620

                                                                 
Query: 421 acacttttcagctagcacacgtctttacagatatctgaaaaagatttcttctat 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acacttttcagctagcacacgtctttacagatatctgaaaaagatttcttctat 674


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space:   400896
Effective search space used:   400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)