NTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTGGTTTTTTTCTATACCCCATTTTTTGATTCAGTTGTTTTTTTG
TTTTTTTGTTTTTTCTTGGTGATTAACTTCTTGGGTTCCTTATATATTTT
GAATATTATCCCTCTATCGGATGTGGGGTTAGTGAAGTTTTCTCCCAATC
TGTAGGTTGCCATTTTGTCTTTTTGACTATGCCTTTGCCTTACAGAAGAT
TTCCAGTTTCATGAGGTCCCATTTATCAATTCTTAATCTTAGAGCATGAG
CCATTGGAGTTTTGTTTATTTAATGTCCCTCTGTGCAAATGAGTTCAAGG
TTCTTTCTGGATTTCTCTTCTATTAGATTCAGTGTATTTGGTTTTATGTT
GAGTTCCTTGTTCCACTTGAATTTGAGCATTGCACAAGGTGACAAATATG
GGTCTATTTTCATTATTCTAAAGACAGACAGCCATTTAGACCAGCACCAT
TTAAGGAAGATGCTTTCTTTTTTCTATTGTATATTTTTGGCATCTTTATC
AAAGATCAAGTGACCATAAGTTTTATTTCCTGGTTCTTCCATTCTATTCC
CCTGACCACATGTCTGTCTCTGTACCAATAACATGAAGGTTTTATCATTA
TTGCTCTGAAGCAAAGCTTTGAGGCCCAGGATCGTGATTCCCCCCCCCTG
TTCTTTTAATATAAGAAACGGGTTTCCCTTATCCTGCGCG

ACTATGCTCTGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXTTTCCCGAAATTCTTTTGTCCAAACCTCTCTTTTAGTTCCT
TTTACTTACTGACTCTAGCCTCATTAGTCACTTTTTGTGGATCTATCTCC
CATTAGACAAGCAATAGGTATTTGGATTCTATTCACACCTAAGAAATTGA
CTCACAAGATACCTACTCTTTCCTATTTTGCACTACCATTTAACCCTACA
CCTAGACATTAAAGCCACTAATTATTAGTATCTTAATTATTGTTGTTGTT
TTGTTTTTGTCTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTTTGAGACAG
GGTTTCTCTGTGTAAACCTGGCTGTCCTGGAACTCACTCTGTAGTCCAAG
CTGGCCTCGAACTCAAAAATCCACCTGCTTCTGCCTCCCAAGTGCTGGGA
TTAAAGGCATGTGCCACCACTGCCCGGCTTAGAATCTTAATTTTTAAAAG
ATGTATTTTATGTTTTTATGGTTTGAGTCTCTGTGTGTGTTTACCTTGTA
TGTGCTGGTGCTATGAAAGGTAGATGACGGTCATGTTCTCTGGAATGGGA
TTTGTAAGCCAATGGGCAGAGTCAAAATAGAACCTGCAATGTCTGCCAGA
ATAGTACATATTCTTAACTGCTGAACCCCTTCCAGATTCCCCATTTTCAT
TTTGGTCTTTTATCCACAGGTTTATGCCAAAAAATAG

Query= MSMg01no470_a19.g1 MSMg01no470_a19.g1 CHROMAT_FILE:
MSMg01no470_a19.g1 PHD_FILE: MSMg01no470_a19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:50 2005
         (565 letters)



>mm_chr16_53486993_53487957
          Length = 965

 Score =  696 bits (360), Expect = 0.0
 Identities = 396/408 (97%), Gaps = 1/408 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcttttgtccaaacctctcttttagttccttttacttactgactctagcctcattagtc 60
           |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||
Sbjct: 408 ttcttttgtccaaacctctcttttagtggcttttacttactgactctagcctcattagtc 349

                                                                       
Query: 61  actttttgtggatctatctcccattagacaagcaataggtatttggattctattcacacc 120
           ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 348 actttttgtggatctttctcccattagacaagcaatagttatttggattctattcacacc 289

                                                                       
Query: 121 taagaaattgactcacaagatacctactctttcctattttgcactaccatttaaccctac 180
           ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 288 taagaaattgactcacaagatacatactctttcctattttgcactgccatttaaccctac 229

                                                                       
Query: 181 acctagacattaaagccactaattattagtatcttaattattgttgttgttttgtttttg 240
           |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 228 acctagacattaaagccactaattattaatatcttaattattgttgttgttttggttttg 169

                                                                       
Query: 241 tcttt-tttttgtttgtttgtttgttttgttttttgagacagggtttctctgtgtaaacc 299
           ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 tcttgctttttgtttgtttgtttgttttgttttttgagacagggtttctctgtgtaaacc 109

                                                                       
Query: 300 tggctgtcctggaactcactctgtagtccaagctggcctcgaactcaaaaatccacctgc 359
           |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 108 tggctgtcctggaactcactctgtagcccaagctagcctcgaactcaaaaatccacctgc 49

                                                           
Query: 360 ttctgcctcccaagtgctgggattaaaggcatgtgccaccactgcccg 407
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48  ttctgcctcccaagtgctgggattaaaggcatgtgccaccactgcccg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space:   530025
Effective search space used:   530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)