Query= MSMg01no470_c14.b1 MSMg01no470_c14.b1 CHROMAT_FILE:
MSMg01no470_c14.b1 PHD_FILE: MSMg01no470_c14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:58 2005
(238 letters)
>mm_chr16_76268763_76269401
Length = 639
Score = 416 bits (215), Expect = e-121
Identities = 233/239 (97%), Gaps = 1/239 (0%)
Strand = Plus / Minus
Query: 1 ataagaatgtactcttactttaatgtaaatctaactgccatgctctttaacaagcgttct 60
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 439 ataagaatgtactctttctttaatgtaaatctaagtgccatgctctttaacaagcgttct 380
Query: 61 ggaaagagatttttatagtagcattgcttaaaattcgttatgcattgtgatcataaaaag 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 379 ggaaagagatttttatagtagcattgcttaaaattcgttatgcattttgatcataaaaag 320
Query: 121 ctaatacatttgatcacatcgtatctattacttttaaaaa-tcttcttagagaagggact 179
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 319 ctaatacatttgatcacatcgtatctattactttaaaaaaatcttcttagagaagggact 260
Query: 180 tccttattccctgtataccagatacacagatcttactgcccaaactctgttgcaatgac 238
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tccttattccctgtatacaagatacacagatcttactgcccaaactctgttgcaatgac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 639
Length adjustment: 9
Effective length of query: 229
Effective length of database: 630
Effective search space: 144270
Effective search space used: 144270
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no470_c14.g1 MSMg01no470_c14.g1 CHROMAT_FILE:
MSMg01no470_c14.g1 PHD_FILE: MSMg01no470_c14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:59 2005
(455 letters)
>mm_chr16_76117039_76117894
Length = 856
Score = 774 bits (400), Expect = 0.0
Identities = 433/444 (97%), Gaps = 1/444 (0%)
Strand = Plus / Plus
Query: 13 aggcctccagccacagaaaacggtggcttttctcatccttgcttccctcccaccagagca 72
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 213 aggcctccagccacagaaaacggtggcttttcacatccttgcttccctcccaccagacca 272
Query: 73 cacagaatcaaacatgaggagaagctgagtgagctgtgcactgctgtggtctgtttagtg 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 273 cacagaatcaaacatgaggagaagctgagtgagctgtgcactgctgtggtctgtttaatg 332
Query: 133 gtagctctgaggtcagagcctgagattcaaggggaatgctgggaaggagactgggctcac 192
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gaagctctgaggtcagagcctgagattcaaggggaatgctgggaaggagactgggctcac 392
Query: 193 tgaatcatcttcatgaagacagagcaatcatgccactatgacatcactgggcttcctatt 252
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 393 tgaatcatcttcatgaagacagagcaatcatgccactatgacatcactgggcttccgaca 452
Query: 253 ctgcaaggggtcaatcaaaattctgcatgtgaagaaatgaaggaatgtccaaggctgtct 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ctgcaaggggtcaatcaaaattctgcatgtgaagaaatgaaggaatgtccaaggctgtct 512
Query: 313 ggattcaggctggaatggtataattaagtaaaagcagatgtctcacagcatattaaagta 372
|||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 513 ggattcaggctggaatgggataattaagtaaaagcagatgtctcacagtatattaaagca 572
Query: 373 tgagacagacatcacttttatttctatagaactctttacaatgttcagttctctttttt- 431
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tgagacagacatcacttttatttctatagaactctttacaatgttcagttctcttttttt 632
Query: 432 atatctatctattcagagccattc 455
||||||||||||||||||||||||
Sbjct: 633 atatctatctattcagagccattc 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 856
Length adjustment: 10
Effective length of query: 445
Effective length of database: 846
Effective search space: 376470
Effective search space used: 376470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
