Query= MSMg01no471_i18.b1 MSMg01no471_i18.b1 CHROMAT_FILE:
MSMg01no471_i18.b1 PHD_FILE: MSMg01no471_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:49 2005
(480 letters)
>mm_chr16_94641424_94642305
Length = 882
Score = 851 bits (440), Expect = 0.0
Identities = 468/478 (97%), Gaps = 2/478 (0%)
Strand = Plus / Minus
Query: 5 gaattccaggccatctcgagttaaatagggaaaccgtgtttcaaaacaacaacaagtact 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gaattccaggccagctagagttaaatagggaaaccgtgtttcaaaacaacaacaagtact 675
Query: 65 agtggaagaagcgaggaagcacttctctctcgcctacgtgcacgctcagcacggtaccca 124
|||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 674 agtggaagaagcaaggaagcacttctctctcgtctacgtgcacgctcagcatggtaccca 615
Query: 125 accatcgcctgggcagaatgaatgaatcac--cagaggccaccttggtgcttcccatggt 182
|||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 614 accatcgcctgggcagaatgaatgaatcaccacagaggccaccttggcgcttcccatggt 555
Query: 183 ttctactgacctgttctttttcaaatacacttttcctattccgcagtaggccaagcagtc 242
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ttccactgacctgttctttttcaaatacacttttcctattccgcagtaggccaagcagtc 495
Query: 243 cagcccctcattgggatagtgttcgataatcctcttaaactggttttcggcttcagacag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 cagcccctcattgggatagtgttcgataatcctcttaaactggttttcggcttcagacag 435
Query: 303 ctccttcaaaagcagcgagaacagtcataggagagaaaagctgaaacagactatcctaag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ctccttcaaaagcagcgagaacagtcataggagagaaaagctgaaacagactatcctaag 375
Query: 363 gttgattcttgtctaatatttagaaaaatacctatgtatcaaaaagtcctattgcaaatt 422
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 374 gttgattcttgtctaatatttagaaaaatacctatgtatcaaaaagttctattgcaaatt 315
Query: 423 ttatcttttttatttcactttcttgtaacttatatgtgtcactcatggaaactcaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ttatcttttttatttcactttcttgtaacttatatgtgtcactcatggaaactcaagg 257
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 882
Length adjustment: 10
Effective length of query: 470
Effective length of database: 872
Effective search space: 409840
Effective search space used: 409840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_i18.g1 MSMg01no471_i18.g1 CHROMAT_FILE:
MSMg01no471_i18.g1 PHD_FILE: MSMg01no471_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:49 2005
(447 letters)
>mm_chr16_94425464_94426308
Length = 845
Score = 787 bits (407), Expect = 0.0
Identities = 437/447 (97%), Gaps = 2/447 (0%)
Strand = Plus / Plus
Query: 1 tgctcaggtgttgtccgccttgttttgtgagactcactttattaagcttggatgaataaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 201 tgctcaggtgttgtccgccttgttttgtgagactcactttattaagcttggatggataga 260
Query: 61 catcaagccacagggagctaccaggcttacccgcctagccctggattacaaatatgtgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 catcaagccacagggagctaccaggcttacccgcctagccctggattacaagtatgtgtc 320
Query: 121 accacacttgaattactacaggagttctggagctcgaactgaatccctcatgattacatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accacacttgaattactacaggagttctggagctcgaactgaatccctcatgattacatg 380
Query: 181 gtggcaagtacatgattggccgagccatcgccacaacctggtgaagatgtccaacaagac 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 gtggcaagtacatgattggccgagccatcgccacagcctggtgaagatgtccaacaagac 440
Query: 241 aggaaagtagtttcggaggtgggtgtcataacctacccttccgggtttagggaaagtaac 300
|||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||| |
Sbjct: 441 aggaaagtagtt-cggaggtgggtgttataacctacccttccgggtttagggagagta-c 498
Query: 301 cctgcaaagcatgcagtggccatgagacatagaagaggggacggaaggaagaatccagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cctgcaaagcatgcagtggccatgagacatagaagaggggacggaaggaagaatccagca 558
Query: 361 attatgcccagagaccaggggaagccccctggctccatgcaagaatactcgcccatacca 420
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 559 attatgcccagagaccaggggaagccccctggctccttgcaagagtactcgcccatacca 618
Query: 421 ctgacatccacacaccaactcctggac 447
|||||||||||||||||||||||||||
Sbjct: 619 ctgacatccacacaccaactcctggac 645
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 845
Length adjustment: 10
Effective length of query: 437
Effective length of database: 835
Effective search space: 364895
Effective search space used: 364895
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
