NCCGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCTGATTTTTCCAAAACTTTTATCATGAATGGGTGTTGGA
TCTTGTCAAATGCTTTTTCTGCATCTAACGAGATGACCATGTGGTTTTTG
TCTTTGAATTTGTTTATATACTGGATTACATTGATGGATTTTCGTATATT
AAACCATCCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGATGGATGA
TTGCTTTAATGTGTTCTTGGATTCGGTTAGCGAGAATTTTATTGAGGATT
TTTGCATCGATATTCATAAGATAAATTGGTCTGAAGTTCTCTATCTTTGT
TGGATCTTTCTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCATAAAATG
AGTTGGGTAGAGTACCTTCTACTTCTATTTTGTGAAATAGTTTGTGCAGA
ATTGGAATTAGATCTTCTTTGAAGGTCTCATAGAACTCTGCACTAAACCC
ATCTGGTCCTGGGCTTTTTTTGGTTGGGAGACTATTAATAACTGCTTCTA
TTTCTTTTGGTGATATGGGACTGTTTAGATGGTCAACTTGATCCTGATTC
AACTTTGGTACCTGGTATCTGTCCAGAAATTTTTCCATTTCGTCCAGGTT
TTCCAGTTTTGTTGAGTATAGCCTTTTGTAGAAGGATCTGACGGTGTTTT
GGATTTCTTCAAGATCTGTTGTTATGTCTCCCCTTTACTTTC

NAATCTATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGTGCCCC
ATTTTTTAATGGGGTTATTTCTGGAGTTCAGCTTCTTGAGCTCTTTGTAT
ATATTGGATATTAGTCCCCTATTAAATTTAGGATTGGTAAAAATCTTTTC
CCAATCTGTTGGTGGCCTTTTTGTCGTATTGACAGTGTCTTTTGCCTTAC
AGAAGCTTTGCAATTTTATGAGGTCCCATTGGTCAATTCTTTATTTTACC
GCACAAGCCATTACTGTTCTGTTTAGGAATTGTTCCCCTGTGCCCATATC
TTCGAGGCTTTTCCCTATTTATTCCTCTATTAATTTCAGTGTCTCTGGTC
TTATGTGGAGGTCTTTGATCCACTTAGACTTGAGCTTTGTACAAGGAGAT
AAGAACAATTCGGAAAGCAAGCAGCTTGTCTCAGCGACCTGGAGCAGCCT
TGCTTGCAGAGCCATCACCATGCCCCTGGCTAGAGATCTATTACACCCTT
CCTTGGAAGAGGAGAAGAAAAAAAAAAACATATGAAGAAACAGCTGGTTT
AGAGCCCAAATTCTTACTTCATGGATGTGAAATGCCCAGGTTGCTACAAG
ATTATTACAGTTTTCAGCCATGTGAAGACTGTGGTTCTTTGTGTGGGTTG
TTCAACTGTGTTGTGCCCCCCCACAGGAGGAAAAGCCAGGCTCAN

Query= MSMg01no471_o02.g1 MSMg01no471_o02.g1 CHROMAT_FILE:
MSMg01no471_o02.g1 PHD_FILE: MSMg01no471_o02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:18 2005
         (572 letters)



>mm_chr16_68887952_68888918
          Length = 967

 Score = 1017 bits (526), Expect = 0.0
 Identities = 559/572 (97%), Gaps = 5/572 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgtttagctctgtgccccattttttaatggggttatttctggagttcagcttcttgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtttagctctgtgccccattttttaatggggttatttctggagttcagcttcttgag 260

                                                                       
Query: 61  ctctttgtatatattggatattagtcccctattaaatttaggattggtaaaaatcttttc 120
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 ctctttgtatatattggatattagtcccctattagatttaggattggtaaaaatcttttc 320

                                                                       
Query: 121 ccaatctgttggtggcctttttgtcgtattgacagtgtcttttgccttacagaagctttg 180
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaatctgttggtggcctttttgtcttattgacagtgtcttttgccttacagaagctttg 380

                                                                       
Query: 181 caattttatgaggtcccattggtcaattctttattttaccgcacaagccattactgttct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caattttatgaggtcccattggtcaattctttattttaccgcacaagccattactgttct 440

                                                                       
Query: 241 gtttaggaattgttcccctgtgcccatatcttcgaggcttttccctatttattcctctat 300
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtttaggaatttttcccctgtgcccatatcttcgaggcttttccctatttattcctctat 500

                                                                       
Query: 301 taatttcagtgtctctggtcttatgtggaggtctttgatccacttagacttgagctttgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taatttcagtgtctctggtcttatgtggaggtctttgatccacttagacttgagctttgt 560

                                                                       
Query: 361 acaaggagataagaacaattcggaaagcaagcagcttgtctcagcgacctggagcagcct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaaggagataagaacaattcggaaagcaagcagcttgtctcagcgacctggagcagcct 620

                                                                       
Query: 421 tgcttgcagagccatcaccatgcccctggctagagatctattacacccttccttggaaga 480
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cgcttgcagagccatcaccatgcccctggctagagatctattacacccttccttggaaga 680

                                                                       
Query: 481 ggagaagaaaaaaaaaaacatatgaagaaacagctggtttagagcccaaattcttacttc 540
           ||||||||||||||||| |||| |||||||||||||||| |||||||||||||||    |
Sbjct: 681 ggagaagaaaaaaaaaa-cataagaagaaacagctggttcagagcccaaattctt----c 735

                                           
Query: 541 atggatgtgaaatgcccaggttgctacaagat 572
           |||||| |||||| ||||||||||||||||||
Sbjct: 736 atggatttgaaatacccaggttgctacaagat 767


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 967
Length adjustment: 10
Effective length of query: 562
Effective length of database: 957
Effective search space:   537834
Effective search space used:   537834
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)