CCTTTAAACTCGGCCGCCGCCAATACCACTCACTATATTCCAGAGGATCC
GCGGAATTCATCATTTTTTTTCTTTTTTAAATTTTAATTAGGTATTTTCT
TCATTTACATTTCCAATGATATCCCAAAAGTTCCCCATACCCTCCCACCC
CCACTTCCCTACACACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTAT
ACTGAAGCATATAAAGTTTGCAAGACCAATGGGCCTCTCTTTCCACTAAT
GGCCAACTAGGCCATCTTCTGATACATATGCAGCTAAAGACATGAGCTCT
GGGGAGGGTGTGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGTGTT
GTAGACCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGG
CCCTGTGATCCATCCAATAGCTGACTGTGTTTGATAGGCCCCTGCATAGC
CTCACAAGAGACAGCAATATCAGGATCTTTTAAGCAAAATCTTGTTGGTG
CATGCAATGATGTCAGTGTTTGGAGGCTGATTATGTCATGGATCCCCGGG
CATGGCAATCTCTAGATGCTACCTCCTCTTGTCTCCACTCTCCACTTCGT
TTCTGTAATTCCTCCCCTGTCCGTTTCTGTCTCCGCCCCCCCCATTTTTC
TATTTGTTCCTCCCTTTCCCTTTCCTTTCCTTTGCTTATCTCCCCCCTTT
TTATTACTGTACTTCATTTTTTTTCCCCCCTCCCTTCTCTCTCCTTCCTT
TTTGTATTN

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACTGATTCTCTTCATCTAGAGGTGG
AGTATTTTGAAATCTCCCTAAACTCTGTTGTCATGTCTTCTGCTGTGGTC
ATTATGTAGATATTACTTTGGCCAATATTTTGTTGAGAATCCATATCTCC
CCTATCATATCAAGAAGAGAGTATCTTATAGCACATGCCATCCACTGGAT
CTCACAATGCCTCTTCTATAATGCCCCCCCGAACATTATGTGTACTATCC
ATGTATCCATATATATCCAACCAAATTGAGTTGTGTATCCCATCATTGCT
GATTTCAAACAACTGTAGATATTTGTAATGTTCCTCTAATCTCAGATGAG
GGGTAATTCCTTCATTATACTTACCTGTGGTTATATGCATACATATTTGG
AATATAGTTCGAAATTATATGGGTTTAGAAATGTTTCAATAATAAATTCC
CCTTTAGGCCTTTCAATGCACTTTTTTCTTCTAGCCATACACCATTACAA
AGAAATTAAAATATATTATTTTTCAAGTGTCTTAATAACCTTTGAACGCT
TTACGACGGTTTACCCTTTGAGAGCCCTTAATCGCGTCTACTTCTCCTTC
CTTATATAATTGCTCTATGTTCTTCGACCATCACACCTTTATCCCCCCTT
TTTTTGGTTTCTTTCTCTACCTTTTCCCCCTTGCCCCCTCCCTTCCATCC
CCTTTTTTCCCCCCC

Query= MSMg01no472_i01.g1 MSMg01no472_i01.g1 CHROMAT_FILE:
MSMg01no472_i01.g1 PHD_FILE: MSMg01no472_i01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:09 2005
         (422 letters)



>mm_chr16_66571091_66571915
          Length = 825

 Score =  799 bits (413), Expect = 0.0
 Identities = 421/425 (99%), Gaps = 3/425 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   actgattctcttcatctagaggtggagtattttgaaatctccctaaactctgttgtcatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 actgattctcttcatctagaggtggagtattttgaaatctccctaaactctgttgtcatg 463

                                                                       
Query: 61  tcttctgctgtggtcattatgtagatattactttggccaatattttgttgagaatccata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tcttctgctgtggtcattatgtagatattactttggccaatattttgttgagaatccata 403

                                                                       
Query: 121 tctcccctatcatatcaagaagagagtatcttatagcacatgccatccactggatctcac 180
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 402 tctcccctatcatatcaagaagagagtatcttacagcacatgccatccactggatctcac 343

                                                                       
Query: 181 aatgcctcttctataatg---cccccccgaacattatgtgtactatccatgtatccatat 237
           ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||
Sbjct: 342 aatgcctcttctataatgccccccccccgaacattatgtgtactatccatgtatccatat 283

                                                                       
Query: 238 atatccaaccaaattgagttgtgtatcccatcattgctgatttcaaacaactgtagatat 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 atatccaaccaaattgagttgtgtatcccatcattgctgatttcaaacaactgtagatat 223

                                                                       
Query: 298 ttgtaatgttcctctaatctcagatgaggggtaattccttcattatacttacctgtggtt 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ttgtaatgttcctctaatctcagatgaggggtaattccttcattatacttacctgtggtt 163

                                                                       
Query: 358 atatgcatacatatttggaatatagttcgaaattatatgggtttagaaatgtttcaataa 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 atatgcatacatatttggaatatagttcgaaattatatgggtttagaaatgtttcaataa 103

                
Query: 418 taaat 422
           |||||
Sbjct: 102 taaat 98


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 825
Length adjustment: 9
Effective length of query: 413
Effective length of database: 816
Effective search space:   337008
Effective search space used:   337008
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)