Query= MSMg01no473_b24.b1 MSMg01no473_b24.b1 CHROMAT_FILE:
MSMg01no473_b24.b1 PHD_FILE: MSMg01no473_b24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:02 2005
(417 letters)
>mm_chr16_64528222_64529038
Length = 817
Score = 752 bits (389), Expect = 0.0
Identities = 404/409 (98%)
Strand = Plus / Plus
Query: 5 gaattctcaaatactttctcaaaacatacactaaaatttagcactacatgacattaaaag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcaaatactttctcaaaacatacactaaaatttagcactacatgacattaaaag 264
Query: 65 atcatattttccttatcgaaggaaataatagaatcttgaagttggaagatccttttagca 124
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 265 atcatattttccttatcgaaggaaataatagaatcctgaagttggaagatccttttagca 324
Query: 125 atgatctaatgcaaatcctctagtttttatcaggaaaaataatgaggtttggggaaaatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgatctaatgcaaatcctctagtttttatcaggaaaaataatgaggtttggggaaaatg 384
Query: 185 aatcatttaaactggctctctacacgttccatcttgaaatatttttattctataagcttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatcatttaaactggctctctacacgttccatcttgaaatatttttattctataagcttc 444
Query: 245 ctaatgagatagagattaatacacattgtaatcaccgttgtaaagaatcaagtgcctaag 304
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 445 ctaatgagatagagattaatacacattgtaatcatcgttgtaaagaatcaagtgcctaag 504
Query: 305 aaggcctgggtccagagtaaatgatttaaagcatttgtcttgccttggtcctgtgaaggc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaggcctgggtccagagtaaatgatttaaagcatttgtcttgccttggtcctgtgaaggc 564
Query: 365 tcgattccccaacgcaggggaatgccagggcggtgaggtgggggggtgg 413
|| ||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 565 tcaattccccaatgcaggggaatgccagggcggtgaggtggggaggtgg 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no473_b24.g1 MSMg01no473_b24.g1 CHROMAT_FILE:
MSMg01no473_b24.g1 PHD_FILE: MSMg01no473_b24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:02 2005
(424 letters)
>mm_chr16_64728782_64729610
Length = 829
Score = 629 bits (325), Expect = 0.0
Identities = 414/471 (87%), Gaps = 49/471 (10%)
Strand = Plus / Minus
Query: 1 tgatgtcccaaagccctggagatggggctacaggttgttgtgagccacgtattgtgggaa 60
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 600 tgatgccccaaagccctggagatggggttacaggttgttgtgagccacgtattgtgggaa 541
Query: 61 ctgaacttgtatatcagaatatatatata------------------------------- 89
|||||||||||||||||||||||||||||
Sbjct: 540 ctgaacttgtatatcagaatatatatatatatatatatatatatatatatatatatatat 481
Query: 90 a-ctaatactaatgttattaactgtattttattaattgtgacttaaaaattttcaagttg 148
| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 atctaacattaatgttattaactgtattttattaattgtgacttaaaaattttcaagttg 421
Query: 149 ggaaaattatagttgagcttcatttgaagtgtaaaatgtaactga----ttttttttttt 204
||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||
Sbjct: 420 ggaaaattatagttgagcttcatttgaagtgcagaatgtaactgattttttttttttttt 361
Query: 205 tgatgtattgtagacattgggacaagtgc--aatatttagcctc--ataaaaataatatt 260
||||||| ||||||||||||||||| || ||||||||||||| ||||||||||||||
Sbjct: 360 tgatgtagtgtagacattgggacaa--gctaaatatttagcctcatataaaaataatatt 303
Query: 261 tgtttcattcctcca-----a--tttatacttaaaatatatccagaatatagtatactta 313
||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgtttcattcctccatttatacttttatacttaaaatatatccagaatatagtatactta 243
Query: 314 taaatagaatatcatatagaaaaatcactcattcaacctctaaactcttattgaccatca 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 taaatagaatatcatatagaaaaatcactcattcaacctctaaactcttattgaccatca 183
Query: 374 gctatgttgcagtcactatgtaggaggtaatgataataacagaacttaggg 424
|||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 182 gctatgttgcagtcactatgtaggaggtgatgataataacagaacttaggg 132
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 829
Length adjustment: 9
Effective length of query: 415
Effective length of database: 820
Effective search space: 340300
Effective search space used: 340300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
