Query= MSMg01no475_f17.b1 MSMg01no475_f17.b1 CHROMAT_FILE:
MSMg01no475_f17.b1 PHD_FILE: MSMg01no475_f17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:06 2005
(249 letters)
>mm_chr16_5676183_5676831
Length = 649
Score = 482 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Minus
Query: 1 atctgcttctgtctgctcacctctcctgacaggaagagagtgtggactcccggagggtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 atctgcttctgtctgctcacctctcctgacaggaagagagtgtggactcccggagggtaa 390
Query: 61 gaagaggtactgccttgtagatttttattgtctggggtctctctacccacccctaccatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gaagaggtactgccttgtagatttttattgtctggggtctctctacccacccctaccatc 330
Query: 121 cctccaagttccaaatcaggtgctctaaaggatcatcgggtgggcaggatagtccgcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cctccaagttccaaatcaggtgctctaaaggatcatcgggtgggcaggatagtccgcatc 270
Query: 181 tgaaatggtgtcagccttggaagactgatgaaactcaaaaaacaagaggctgggcagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tgaaatggtgtcagccttggaagactgatgaaactcaaaaaacaagaggctgggcagaca 210
Query: 241 gcttagtag 249
|||||||||
Sbjct: 209 gcttagtag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no475_f17.g1 MSMg01no475_f17.g1 CHROMAT_FILE:
MSMg01no475_f17.g1 PHD_FILE: MSMg01no475_f17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:06 2005
(343 letters)
>mm_chr16_5513662_5514404
Length = 743
Score = 632 bits (327), Expect = 0.0
Identities = 339/343 (98%)
Strand = Plus / Plus
Query: 1 accgattcagctaaatttcctggctatcaaaccctagatatctgtctgtctgtctgtctc 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accgattcagctagatttcctggctatcaaaccctagatatctgtctgtctgtctgtctc 260
Query: 61 aacctccccagttgtctcatcaagatttcttttgcttttgcaaagcacctccaccaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacctccccagttgtctcatcaagatttcttttgcttttgcaaagcacctccaccaaatg 320
Query: 121 tggggggaaaggctcgtgtcacttactgctccccatcatagacatgaggaaagtgagggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggggggaaaggctcgtgtcacttactgctccccatcatagacatgaggaaagtgagggc 380
Query: 181 cgggagccatgggttccagccctgcagaggccatgaagaggtgctgctcactggcttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgggagccatgggttccagccctgcagaggccatgaagaggtgctgctcactggcttgct 440
Query: 241 tcttatgtcttgctcagtctgctacagtgagctgctcccccacctcccatcattcattaa 300
|| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctcatggcttgctcagtctgctacagtgagctgctcccccacctcccatcattcattaa 500
Query: 301 gcagcaaccaagaaaatgagccacaggcatacccacaggccaa 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcagcaaccaagaaaatgagccacaggcatacccacaggccaa 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
