Query= MSMg01no475_p09.b1 MSMg01no475_p09.b1 CHROMAT_FILE:
MSMg01no475_p09.b1 PHD_FILE: MSMg01no475_p09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:54 2005
(537 letters)
>mm_chr16_52729404_52730339
Length = 936
Score = 963 bits (498), Expect = 0.0
Identities = 525/534 (98%), Gaps = 1/534 (0%)
Strand = Plus / Minus
Query: 1 aaagaaatgtataactatggagaggagagactactgacttctataaacattctaaaggat 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 aaagaaatgtataactctggagaggagagactactgacttctataaacattctaaaggat 674
Query: 61 ctataagttcagtacacctaagagctagcaagccagagaaacctctatagttctctccag 120
||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||
Sbjct: 673 ctataagttcagtacacctaagagctagcaagccaaagaaacctccaaagttctctccag 614
Query: 121 ttctgtgattctgagctttgtgatctttatgtcaagataaaaaactagtattaatattcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ttctgtgattctgagctttgtgatctttatgtcaagataaaaaactagtattaatattcc 554
Query: 181 aagaacgtataatcaaaatggaaataacaagtacggtccaaatctatcatcttatgaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aagaacgtataatcaaaatggaaataacaagtacggtccaaatctatcatcttatgaatt 494
Query: 241 tttacagtgttccttgtgtgtttctttgttagtaatctcacatatactacacaaacttag 300
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tttacagtgtgccatgtgtgtttctttgttagtaatctcacatatactacacaaacttag 434
Query: 301 catattaaatatatgtattatgacacctcaagctaaaactaaagagtcagagggtctact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 catattaaatatatgtattatgacacctcaagctaaaactaaagagtcagagggtctact 374
Query: 361 aagatttaacaataaggcagtagcggagtatttattaaacctagctccaaagtgcttgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aagatttaacaataaggcagtagcggagtatttattaaacctagctccaaagtgcttgtt 314
Query: 421 tacatgaccacacattatgttttgataaatgtatgacaggccatcagcctcttctaataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tacatgaccacacattatgttttgataaatgtatgacaggccatcagcctcttctaataa 254
Query: 481 ataggaaaaaaagtatttttcttaaaaataaactttttgacagtatttaagata 534
|||||||||||||||||||||||||||||||| |||| ||||||| ||||||||
Sbjct: 253 ataggaaaaaaagtatttttcttaaaaataaagtttt-gacagtacttaagata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 936
Length adjustment: 10
Effective length of query: 527
Effective length of database: 926
Effective search space: 488002
Effective search space used: 488002
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_p09.g1 MSMg01no475_p09.g1 CHROMAT_FILE:
MSMg01no475_p09.g1 PHD_FILE: MSMg01no475_p09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:54 2005
(234 letters)
>mm_chr16_52559985_52560618
Length = 634
Score = 426 bits (220), Expect = e-124
Identities = 229/232 (98%)
Strand = Plus / Plus
Query: 1 atctgccactatcaagattttttgtgtttctttgcttcttttattctttgaaactccatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctgccactatcaagattttttgtgtttctttgcttcttttattctttgaaactccatg 260
Query: 61 aagcatattctaaattactttttgttttctaattcggatgaatttttatttttgtttgtt 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 aagcatattctaaattactttttgttttctaattcagatgaatttttatttttgtttgtt 320
Query: 121 tgcttttatgattcaggtcttgcaaaaatcaaacctgtttggaaatgatagagcaaaaac 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 tgcttttatgattcaggtcttgcaaaaatcaaatctgtttggaaatgatagagcaaaaac 380
Query: 181 tcattcattccttatattgctttgcaaccagaacacatcaagcctagaacta 232
||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 tcattcattccttatattgctttgcaacccgaacacatcaagcctagaacta 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
