Query= MSMg01no476_h14.b1 MSMg01no476_h14.b1 CHROMAT_FILE:
MSMg01no476_h14.b1 PHD_FILE: MSMg01no476_h14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:35 2005
(270 letters)
>mm_chr16_6973336_6974005
Length = 670
Score = 513 bits (265), Expect = e-150
Identities = 268/269 (99%)
Strand = Plus / Minus
Query: 1 ctcatgccatccaagccctcatatccatcagcagagttgcttttatgaacgagataggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ctcatgccatccaagccctcatatccatcagcagagttgcttttatgaacgagataggct 379
Query: 61 gagagcaaaatacaagtcagtgtaaagaatgaatggagttgttaggagatgagtgagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gagagcaaaatacaagtcagtgtaaagaatgaatggagttgttaggagatgagtgagcag 319
Query: 121 agagtaaagaagaggtgactttagctgcgatagaaataaattataaggaggtcaagatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 agagtaaagaagaggtgactttagctgcgatagaaataaattataaggaggtcaagatgc 259
Query: 181 catgagaagcaaaggataaggctgggaaggtttatcacagtcagactttcaaaaaggggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 258 catgagaagcaaaggataaggctgggaaggtttatcacagtcagactttcagaaaggggt 199
Query: 241 gtgtgtgtgtgtgtgtgtgtgtgtgtgtg 269
|||||||||||||||||||||||||||||
Sbjct: 198 gtgtgtgtgtgtgtgtgtgtgtgtgtgtg 170
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 670
Length adjustment: 9
Effective length of query: 261
Effective length of database: 661
Effective search space: 172521
Effective search space used: 172521
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no476_h14.g1 MSMg01no476_h14.g1 CHROMAT_FILE:
MSMg01no476_h14.g1 PHD_FILE: MSMg01no476_h14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:36 2005
(557 letters)
>mm_chr16_6781464_6782420
Length = 957
Score = 1067 bits (552), Expect = 0.0
Identities = 555/556 (99%)
Strand = Plus / Plus
Query: 1 acagaggaacacataagatgaaatttaaactggaccacagtccttaaaaaatgcttccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagaggaacacataagatgaaatttaaactggaccacagtccttaaaaaatgcttccaa 260
Query: 61 aggcttggggacattaagattgtaatgtattctcatcctttccagggatcagaggaagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggcttggggacattaagattgtaatgtattctcatcctttccagggatcagaggaagct 320
Query: 121 agtcgtggagcagcctgggtacctcactgtaggatacgctcctctctaggttctacttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtcgtggagcagcctgggtacctcactgtaggatacgctcctctctaggttctacttag 380
Query: 181 gaaatataaatcttcttcaccatcctttttaatgtcttcaccacactacacataatttgt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaatataaatcttcttcaccatcctttttaatgtcttcaccacactacacataatttgg 440
Query: 241 gtttgagaataaagtcaagtttggatatgttcttttctaccctctctaatatctcatgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtttgagaataaagtcaagtttggatatgttcttttctaccctctctaatatctcatgag 500
Query: 301 taatttttatgatagcagtgtttactgttatgaaaaaatgttatgatagacataggtacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taatttttatgatagcagtgtttactgttatgaaaaaatgttatgatagacataggtacc 560
Query: 361 agaactgtctatgaaccaatggtctgggattgaatcaggaactcctcacatagccggggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaactgtctatgaaccaatggtctgggattgaatcaggaactcctcacatagccggggt 620
Query: 421 ggtgctagacctataagaattgtgcatataccagtgagctcttgttgaaagcaggatctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggtgctagacctataagaattgtgcatataccagtgagctcttgttgaaagcaggatctt 680
Query: 481 ctggcatagctaggatagataattttagacccagtgtgcaatagtggtggaacatggccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctggcatagctaggatagataattttagacccagtgtgcaatagtggtggaacatggccc 740
Query: 541 tccagcatgattccaa 556
||||||||||||||||
Sbjct: 741 tccagcatgattccaa 756
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
