Query= MSMg01no476_o16.b1 MSMg01no476_o16.b1 CHROMAT_FILE:
MSMg01no476_o16.b1 PHD_FILE: MSMg01no476_o16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:11 2005
(597 letters)
>mm_chr16_83807240_83808236
Length = 997
Score = 1050 bits (543), Expect = 0.0
Identities = 584/599 (97%), Gaps = 4/599 (0%)
Strand = Plus / Minus
Query: 1 ataagcattctctagtactgacttattgttagtgaactctgttctttttgtattatacat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 797 ataagcattctctagtactgacttattgttagtgaactctgttctttttgtattatacgt 738
Query: 61 aggattcagtgacaagataatgaagtaaaggaaattttatgtagaaacatctaattatct 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 737 aggattcagtgacaagataatgaagtaaaggaaattttatgtagaaacatttaattatct 678
Query: 121 atttaaagattttattttttgatttggagagtcatggctgtattcaaaggctattaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 677 atttaaagattttattttttgatttggagagtcatggctgtattcaaagtctattaaaaa 618
Query: 181 atgttgcctagctactagccaggttcataagggagattcactctcctacaactgattctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 atgttgcctagctactagccaggttcataagggagattcactctcctacaactgattctt 558
Query: 241 tgatagacttttctggaattggttcttatattgacatgcttacataagccctttgtagta 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tgatagactttcctggaattggttcttatattgacatgcttacataagccctttgtagta 498
Query: 301 cagacttgaggtgcagtaaagaacacacctcttaagcaaccatgctcaaagaaatgcata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cagacttgaggtgcagtaaagaacacacctcttaagcaaccatgctcaaagaaatgcata 438
Query: 361 gaattacatccttcccaaaacttcaatttccctctcttcttccttgtacttcttcttttt 420
|||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||
Sbjct: 437 gaattacatccttcccaaaacttcaatttctctctcttcttgcttgtacttctt--tttt 380
Query: 421 ttctgctttctaatgtaaaatttaagtaatttaatcacggcttttttctattcttgcata 480
|||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 379 ttctgcgttctaatgtaaaatttaagtaatttaatcactgtttttttctattcttgcata 320
Query: 481 gtttaaggttatacatttctctccaagtacatttaagttgtatctcacaaactttgtt-- 538
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 319 gtttaaggttatacatttctctccaagtacatttaagttgtatctcacaagctttgttaa 260
Query: 539 gtcatgtcttatgtagcaccatagatttaaactgttatttcattgaattgtttttactt 597
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gtcatgtcttatgtagcaccatagatttaaactgttatttcattgaattgtttttactt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no476_o16.g1 MSMg01no476_o16.g1 CHROMAT_FILE:
MSMg01no476_o16.g1 PHD_FILE: MSMg01no476_o16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:11 2005
(404 letters)
>mm_chr16_83680956_83681760
Length = 805
Score = 723 bits (374), Expect = 0.0
Identities = 398/406 (98%), Gaps = 3/406 (0%)
Strand = Plus / Plus
Query: 1 atctatgtttcatatttatatgagcataagaattcacagggaatggtgaccaatatctaa 60
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 atctatgcttcatatttatatgagcataagaattcacaggaaatggtgaccaatatctaa 260
Query: 61 tttagggaagaaatcattagacattaaataaatttcaggacaagacaagagaatttcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttagggaagaaatcattagacattaaataaatttcaggacaagacaagagaatttcagg 320
Query: 121 acatatcattcaaaacacttggatattaaggcaaagcattcaatacatgtttggtgtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatatcattcaaaacacttggatattaaggcaaagcattcaatacatgtttggtgtgat 380
Query: 181 aattgatacaggataaaatatatttacaaagtaaggttaagttggtaaatgtagatgagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aattgatacaggataaaatatatttacaaagtaaggttaagttggtaaatgtagatgagg 440
Query: 241 ttttatcttctaa-tctgggaagggaattgtataggatgaaaaggactgtaacatccttg 299
|||||| || ||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 ttttat-ttataaatctgggaagggaattgtataggatgaaaaggactggaacatccttg 499
Query: 300 atcatgtttctgagaggtgagtgctatcctcacaactgaagttgccactgcattgctgtg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atcatgtttctgagaggtgagtgctatcctcacaactgaagttgccactgcattgctgtg 559
Query: 360 ttttccagagcagaggaagcgaacaattcttttttttttt-ctagt 404
||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 560 ttttccagagcagaggaagtgaacaattcttttttttttttctagt 605
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 805
Length adjustment: 9
Effective length of query: 395
Effective length of database: 796
Effective search space: 314420
Effective search space used: 314420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
