MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-477K13
Chromosome	16 (Build37)
Map Location	16,367,142 - 16,367,578
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC547302, EG632352, Ube2v2, LOC665682, Mcm4, Prkdc, 2410018G20Rik, Cebpd, 2310008H04Rik, LOC100043266, LOC224010, D16Ertd727e, Pkp2, EG433003, Yars2, Dnm1l, LOC665743
Downstream gene	Fgd4, Olfr19, 4933404G15Rik, Spag6, EG665562, EG436405, Vpreb1, Top3b, Ppm1f, LOC100042783, EG623519, Mapk1, Ypel1, Ppil2, 2610318N02Rik, Sdf2l1, LOC623568, Ccdc116, 1810015A11Rik, Ube2l3, Gm603, Hic2, D16Bwg1494e, Pik4ca, Serpind1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC547302 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:547302
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG632352 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:632352 MGI:3642962
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 245 ESTs, 10 Proteins pseudo : _no_value

name	Ube2v2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70620 MGI:1917870
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665682 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665682
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 119 ESTs, 3 Proteins pseudo : _no_value

name	Mcm4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17217 MGI:103199
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prkdc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19090 MGI:104779
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410018G20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72083 MGI:1922845
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cebpd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12609 MGI:103573
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310008H04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224008 MGI:1924834
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043266 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043266
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 310 ESTs, 10 Proteins

name	LOC224010 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:224010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	D16Ertd727e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:623331 MGI:1289219
definition	note : DNA segment, Chr 16, ERATO Doi 727, expressed pseudo : _no_value

name	Pkp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67451 MGI:1914701
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG433003 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433003 MGI:3648103
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 302 ESTs, 7 Proteins

name	Yars2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70120 MGI:1917370
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnm1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74006 MGI:1921256
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC665743 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665743
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 8 Proteins pseudo : _no_value

name	Fgd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224014 MGI:2183747
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Olfr19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18316 MGI:109316
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933404G15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74066 MGI:1921316
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Spag6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50525 MGI:1354388
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665562 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665562 MGI:3645866
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 661 ESTs, 7 Proteins

name	EG436405 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:436405 MGI:3647546
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Vpreb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22362 MGI:98936
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Top3b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21976 MGI:1333803
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppm1f (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68606 MGI:1918464
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042783 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042783
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG623519 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:623519 MGI:3647845
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 9 Proteins

name	Mapk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26413 MGI:1346858
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ypel1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106369 MGI:1913303
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppil2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66053 MGI:2447857
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2610318N02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70458 MGI:1917708
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sdf2l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64136 MGI:2149842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC623568 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623568
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 70 ESTs, 1 Protein

name	Ccdc116 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76872 MGI:1924122
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1810015A11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69101 MGI:1916351
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ube2l3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22195 MGI:109240
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm603 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239731 MGI:2685449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hic2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58180 MGI:1929869
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D16Bwg1494e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224019 MGI:107238
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 27 ESTs, 1 Protein

name	Pik4ca (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224020 MGI:2448506
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Serpind1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15160 MGI:96051
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ube2v2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802283 GeneID:70620 MGI:1917870
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-conjugating enzyme E2 variant 2 transcript_id : NM_023585.3

name	Mcm4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982196 GeneID:17217 MGI:103199
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : minichromosome maintenance deficient 4 homolog (S. cerevisiae) transcript_id : NM_008565.2

name	Prkdc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124517705 GeneID:19090 MGI:104779
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase, DNA activated, catalytic polypeptide transcript_id : NM_011159.2

name	2410018G20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801811 GeneID:72083 MGI:1922845
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410018G20 gene transcript_id : NM_029354.2

name	Cebpd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110665734 GeneID:12609 MGI:103573
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CCAAT/enhancer binding protein (C/EBP), delta transcript_id : NM_007679.4

name	2310008H04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801762 GeneID:224008 MGI:1924834
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310008H04 gene transcript_id : NM_146068.3

name	LOC100043266 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267400 GeneID:100043266
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 310 ESTs, 10 Proteins product : similar to cytochrome c transcript_id : XM_001480401.1

name	Pkp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349260 GeneID:67451 MGI:1914701
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : plakophilin 2 transcript_id : NM_026163.2

name	EG433003 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267402 GeneID:433003 MGI:3648103
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 302 ESTs, 7 Proteins product : predicted gene, EG433003 transcript_id : XM_484529.5

name	Yars2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39930578 GeneID:70120 MGI:1917370
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tyrosyl-tRNA synthetase 2 (mitochondrial) transcript_id : NM_198246.1

name	Dnm1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71061454 GeneID:74006 MGI:1921256
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynamin 1-like transcript_id : NM_001025947.1

name	Dnm1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71061457 GeneID:74006 MGI:1921256
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynamin 1-like transcript_id : NM_152816.2

name	Fgd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367762 GeneID:224014 MGI:2183747
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FYVE, RhoGEF and PH domain containing 4 transcript_id : NM_139232.2

name	Fgd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22296594 GeneID:224014 MGI:2183747
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FYVE, RhoGEF and PH domain containing 4 transcript_id : NM_139233.1

name	Fgd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144226238 GeneID:224014 MGI:2183747
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FYVE, RhoGEF and PH domain containing 4 transcript_id : NM_139234.2

name	Olfr19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22380644 GeneID:18316 MGI:109316
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 19 transcript_id : NM_146335.1

name	Spag6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7657606 GeneID:50525 MGI:1354388
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sperm associated antigen 6 transcript_id : NM_015773.1

name	EG665562 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400069 GeneID:665562 MGI:3645866
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 661 ESTs, 7 Proteins product : predicted gene, EG665562 transcript_id : XM_983910.1

name	Vpreb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:8850237 GeneID:22362 MGI:98936
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pre-B lymphocyte gene 1 transcript_id : NM_016982.1

name	Top3b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981463 GeneID:21976 MGI:1333803
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : topoisomerase (DNA) III beta transcript_id : NM_011624.2

name	Ppm1f (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802638 GeneID:68606 MGI:1918464
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein phosphatase 1F (PP2C domain containing) transcript_id : NM_176833.3

name	EG623519 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400085 GeneID:623519 MGI:3647845
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 9 Proteins product : predicted gene, EG623519 transcript_id : XM_979469.1

name	Mapk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84579911 GeneID:26413 MGI:1346858
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen activated protein kinase 1 transcript_id : NM_011949.3

name	Mapk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84579908 GeneID:26413 MGI:1346858
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen activated protein kinase 1 transcript_id : NM_001038663.1

name	Ypel1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803381 GeneID:106369 MGI:1913303
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : yippee-like 1 (Drosophila) transcript_id : NM_023249.3

name	Ppil2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131059 GeneID:66053 MGI:2447857
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peptidylprolyl isomerase (cyclophilin)-like 2 transcript_id : NM_144954.2

name	2610318N02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71274187 GeneID:70458 MGI:1917708
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2610318N02 gene transcript_id : NM_183287.2

name	Sdf2l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982679 GeneID:64136 MGI:2149842
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stromal cell-derived factor 2-like 1 transcript_id : NM_022324.2

name	LOC623568 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267406 GeneID:623568
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 70 ESTs, 1 Protein product : similar to ribosomal protein S20 transcript_id : XM_001480472.1

name	Ccdc116 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037470 GeneID:76872 MGI:1924122
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 116 transcript_id : NM_029779.1

name	1810015A11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142356917 GeneID:69101 MGI:1916351
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1810015A11 gene transcript_id : NM_026940.2

name	Ube2l3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892277 GeneID:22195 MGI:109240
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-conjugating enzyme E2L 3 transcript_id : NM_009456.2

name	Gm603 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345436 GeneID:239731 MGI:2685449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 603, (NCBI) transcript_id : NM_001033338.2

name	Hic2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70887766 GeneID:58180 MGI:1929869
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypermethylated in cancer 2 transcript_id : NM_178922.3

name	D16Bwg1494e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267414 GeneID:224019 MGI:107238
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 27 ESTs, 1 Protein product : DNA segment, Chr 16, Brigham & Women's Genetics 1494 expressed transcript_id : XM_358773.6

name	Pik4ca (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50233837 GeneID:224020 MGI:2448506
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol 4-kinase, catalytic, alpha polypeptide transcript_id : NM_001001983.1

name	Serpind1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:59709438 GeneID:15160 MGI:96051
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine (or cysteine) peptidase inhibitor, clade D, member 1 transcript_id : NM_008223.2

name	Ube2v2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543918 GeneID:70620 MGI:1917870
definition	GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA] GO_process : GO:0006464 - protein modification [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : ubiquitin-conjugating enzyme E2 variant 2 protein_id : NP_076074.2

name	Mcm4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982197 CCDS:CCDS27977.1 GeneID:17217 MGI:103199
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IPI]; GO:0008094 - DNA-dependent ATPase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003697 - single-stranded DNA binding [Evidence IPI] GO_process : GO:0006260 - DNA replication [Evidence IEA]; GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006268 - DNA unwinding during replication [Evidence IPI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Mcm4(cdc21); mini chromosome maintenance deficient 4 homolog product : minichromosome maintenance complex component 4 protein_id : NP_032591.2

name	Prkdc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124517706 CCDS:CCDS27978.1 GeneID:19090 MGI:104779
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004677 - DNA-dependent protein kinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IMP]; GO:0007420 - brain development [Evidence IGI]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006302 - double-strand break repair [Evidence IMP]; GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]; GO:0007507 - heart development [Evidence IGI]; GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0001756 - somitogenesis [Evidence IGI]; GO:0000723 - telomere maintenance [Evidence IMP] codon_start : 1 note : DNA-dependent protein kinase catalytic subunit; severe combined immunodeficiency product : protein kinase, DNA activated, catalytic polypeptide protein_id : NP_035289.2

name	2410018G20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312988 CCDS:CCDS27979.1 GeneID:72083 MGI:1922845
definition	codon_start : 1 product : hypothetical protein LOC72083 protein_id : NP_083630.1

name	Cebpd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347410 GeneID:12609 MGI:103573
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0046982 - protein heterodimerization activity [Evidence IDA]; GO:0042803 - protein homodimerization activity [Evidence IDA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : CCAAT/enhancer binding protein delta protein_id : NP_031705.3

name	2310008H04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541868 CCDS:CCDS27980.1 GeneID:224008 MGI:1924834
definition	codon_start : 1 product : hypothetical protein LOC224008 protein_id : NP_666180.2

name	LOC100043266 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267401 GeneID:100043266
definition	codon_start : 1 product : similar to cytochrome c protein_id : XP_001480451.1

name	Pkp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312960 CCDS:CCDS27981.1 GeneID:67451 MGI:1914701
definition	GO_component : GO:0005912 - adherens junction [Evidence IMP] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0016337 - cell-cell adhesion [Evidence IMP]; GO:0007507 - heart development [Evidence IMP] codon_start : 1 product : plakophilin 2 protein_id : NP_080439.1

name	EG433003 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51829956 GeneID:433003 MGI:3648103
definition	codon_start : 1 product : similar to ribosomal protein L30 protein_id : XP_484529.1

name	Yars2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930579 CCDS:CCDS27983.1 GeneID:70120 MGI:1917370
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] [Evidence IEA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004831 - tyrosine-tRNA ligase activity [Evidence ISS] GO_process : GO:0006412 - protein biosynthesis [Evidence ISS] [Evidence IEA] codon_start : 1 product : tyrosyl-tRNA synthetase 2 (mitochondrial) protein_id : NP_937889.1

name	Dnm1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71061455 CCDS:CCDS27984.1 GeneID:74006 MGI:1921256
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : dynamin 1-like isoform b protein_id : NP_001021118.1

name	Dnm1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71061458 CCDS:CCDS27985.1 GeneID:74006 MGI:1921256
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : dynamin 1-like isoform a protein_id : NP_690029.2

name	Fgd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29336047 CCDS:CCDS27986.1 GeneID:224014 MGI:2183747
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030175 - filopodium [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence ISS] [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007257 - activation of JNK activity [Evidence ISS]; GO:0030032 - lamellipodium biogenesis [Evidence IDA]; GO:0030035 - microspike biogenesis [Evidence IDA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 note : isoform alpha is encoded by transcript variant alpha; frabin; Fgd1-related F-actin-binding protein product : FYVE, RhoGEF and PH domain containing 4 isoform alpha protein_id : NP_631978.1

name	Fgd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22296595 GeneID:224014 MGI:2183747
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030175 - filopodium [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence ISS] [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007257 - activation of JNK activity [Evidence ISS]; GO:0030032 - lamellipodium biogenesis [Evidence IDA]; GO:0030035 - microspike biogenesis [Evidence IDA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 note : isoform beta is encoded by transcript variant beta; frabin; Fgd1-related F-actin-binding protein product : FYVE, RhoGEF and PH domain containing 4 isoform beta protein_id : NP_631979.1

name	Fgd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22296599 GeneID:224014 MGI:2183747
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030175 - filopodium [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence ISS] [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007257 - activation of JNK activity [Evidence ISS]; GO:0030032 - lamellipodium biogenesis [Evidence IDA]; GO:0030035 - microspike biogenesis [Evidence IDA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 note : isoform gamma is encoded by transcript variant gamma; frabin; Fgd1-related F-actin-binding protein product : FYVE, RhoGEF and PH domain containing 4 isoform gamma protein_id : NP_631980.1

name	Olfr19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22380645 CCDS:CCDS27987.1 GeneID:18316 MGI:109316
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : olfactory receptor MOR140-1; GA_x54KRFPKG5P-13123979-13123050 product : olfactory receptor 19 protein_id : NP_666447.1

name	Spag6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7657607 CCDS:CCDS27988.1 GeneID:50525 MGI:1354388
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0019861 - flagellum [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0030317 - sperm motility [Evidence IMP]; GO:0007283 - spermatogenesis [Evidence IMP] codon_start : 1 note : axoneme protein; sperm-associated antigen 6 product : sperm associated antigen 6 protein_id : NP_056588.1

name	EG665562 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149267404 GeneID:665562 MGI:3645866
definition	codon_start : 1 product : hypothetical protein protein_id : XP_989004.2

name	Vpreb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8850238 CCDS:CCDS27989.1 GeneID:22362 MGI:98936
definition	GO_component : GO:0005886 - plasma membrane [Evidence IPI] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IPI] GO_process : GO:0030097 - hemopoiesis [Evidence IMP]; GO:0006955 - immune response [Evidence IPI] codon_start : 1 product : pre-B lymphocyte gene 1 protein_id : NP_058678.1

name	Top3b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755851 CCDS:CCDS27990.1 GeneID:21976 MGI:1333803
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000793 - condensed chromosome [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003917 - DNA topoisomerase type I activity [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA] GO_process : GO:0007059 - chromosome segregation [Evidence IMP]; GO:0006304 - DNA modification [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]; GO:0006268 - DNA unwinding during replication [Evidence IEA] codon_start : 1 note : Topo III beta product : topoisomerase (DNA) III beta protein_id : NP_035754.1

name	Ppm1f (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28849881 CCDS:CCDS27991.1 GeneID:68606 MGI:1918464
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA] codon_start : 1 note : calcium/calmodulin-dependent protein kinase phosphatase; partner of PIX2 product : protein phosphatase 1F (PP2C domain containing) protein_id : NP_789803.1

name	EG623519 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94400086 GeneID:623519 MGI:3647845
definition	codon_start : 1 product : similar to Ribosomal protein S27a protein_id : XP_984563.1

name	Mapk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84579909 CCDS:CCDS27992.1 GeneID:26413 MGI:1346858
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IDA]; GO:0004707 - MAP kinase activity [Evidence IDA] [Evidence IMP] [Evidence TAS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0001784 - phosphotyrosine binding [Evidence IMP]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IDA]; GO:0004674 - protein serine/threonine kinase activity [Evidence ISS] [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0019858 - cytosine metabolism [Evidence IDA]; GO:0000165 - MAPKKK cascade [Evidence IDA]; GO:0009887 - organ morphogenesis [Evidence IDA]; GO:0018105 - peptidyl-serine phosphorylation [Evidence ISS]; GO:0016310 - phosphorylation [Evidence TAS]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0006974 - response to DNA damage stimulus [Evidence IDA]; GO:0007165 - signal transduction [Evidence TAS] codon_start : 1 product : mitogen activated protein kinase 1 protein_id : NP_001033752.1

name	Mapk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754632 CCDS:CCDS27992.1 GeneID:26413 MGI:1346858
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IDA]; GO:0004707 - MAP kinase activity [Evidence IDA] [Evidence IMP] [Evidence TAS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0001784 - phosphotyrosine binding [Evidence IMP]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IDA]; GO:0004674 - protein serine/threonine kinase activity [Evidence ISS] [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0019858 - cytosine metabolism [Evidence IDA]; GO:0000165 - MAPKKK cascade [Evidence IDA]; GO:0009887 - organ morphogenesis [Evidence IDA]; GO:0018105 - peptidyl-serine phosphorylation [Evidence ISS]; GO:0016310 - phosphorylation [Evidence TAS]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0006974 - response to DNA damage stimulus [Evidence IDA]; GO:0007165 - signal transduction [Evidence TAS] codon_start : 1 product : mitogen activated protein kinase 1 protein_id : NP_036079.1

name	Ypel1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17865319 GeneID:106369 MGI:1913303
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : cardiac Abnormality/abnormal facies (CATCH22), microdeletion syndrome product : yippee-like 1 protein_id : NP_075738.1

name	Ppil2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30025020 CCDS:CCDS27993.1 GeneID:66053 MGI:2447857
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0000151 - ubiquitin ligase complex [Evidence IEA] GO_function : GO:0016853 - isomerase activity [Evidence IEA]; GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0016567 - protein ubiquitination [Evidence IEA] codon_start : 1 product : peptidylprolyl isomerase-like 2 protein_id : NP_659203.1

name	2610318N02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71274188 GeneID:70458 MGI:1917708
definition	codon_start : 1 product : hypothetical protein LOC70458 protein_id : NP_899110.2

name	Sdf2l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11612505 GeneID:64136 MGI:2149842
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : stromal cell-derived factor 2-like 1 protein_id : NP_071719.1

name	LOC623568 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267407 GeneID:623568
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480522.1

name	Ccdc116 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037471 CCDS:CCDS27995.1 GeneID:76872 MGI:1924122
definition	codon_start : 1 exception : mismatches in translation product : coiled-coil domain containing 116 protein_id : NP_084055.1

name	1810015A11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63003923 CCDS:CCDS27996.1 GeneID:69101 MGI:1916351
definition	codon_start : 1 product : hypothetical protein LOC69101 protein_id : NP_081216.1

name	Ube2l3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678481 CCDS:CCDS27997.1 GeneID:22195 MGI:109240
definition	GO_component : GO:0000151 - ubiquitin ligase complex [Evidence ISS] GO_function : GO:0019899 - enzyme binding [Evidence ISS]; GO:0004840 - ubiquitin conjugating enzyme activity [Evidence ISS] [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence ISS] [Evidence IEA] GO_process : GO:0006511 - ubiquitin-dependent protein catabolism [Evidence ISS] [Evidence IEA] codon_start : 1 note : ubiquitin-conjugating enzyme 7 product : ubiquitin-conjugating enzyme E2L 3 protein_id : NP_033482.1

name	Gm603 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701828 CCDS:CCDS27998.1 GeneID:239731 MGI:2685449
definition	codon_start : 1 product : hypothetical protein LOC239731 protein_id : NP_001028510.1

name	Hic2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70887767 CCDS:CCDS27999.1 GeneID:58180 MGI:1929869
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS] [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : hypermethylated in cancer 2 protein_id : NP_849253.2

name	D16Bwg1494e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149267415 GeneID:224019 MGI:107238
definition	codon_start : 1 product : hypothetical protein LOC224019 protein_id : XP_358773.3

name	Pik4ca (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50233838 GeneID:224020 MGI:2448506
definition	GO_function : GO:0004428 - inositol or phosphatidylinositol kinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : phosphatidylinositol 4-kinase, catalytic, alpha polypeptide protein_id : NP_001001983.1

name	Serpind1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:59709439 CCDS:CCDS28000.1 GeneID:15160 MGI:96051
definition	GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0008201 - heparin binding [Evidence IEA]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0007596 - blood coagulation [Evidence IEA] codon_start : 1 exception : mismatches in translation note : heparin cofactor II; HC II; serine (or cysteine) proteinase inhibitor, clade D (heparin cofactor), member 1 product : serine (or cysteine) proteinase inhibitor, clade D, member 1 protein_id : NP_032249.2

name	LOC547302 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547302
definition	number : 1 pseudo : _no_value

name	LOC224010 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:224010
definition	number : 1 pseudo : _no_value

name	EG436405 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:436405
definition	number : 1 pseudo : _no_value

name	LOC100042783 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042783
definition	number : 1 pseudo : _no_value

name	LOC100042783 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042783
definition	number : 2 pseudo : _no_value

name	EG632352 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94400078 GeneID:632352 MGI:3642962
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 245 ESTs, 10 Proteins product : predicted gene, EG632352 pseudo : _no_value transcript_id : XR_001767.1

name	LOC665682 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149267395 GeneID:665682
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 119 ESTs, 3 Proteins product : similar to Translocase of outer mitochondrial membrane 20 homolog (yeast) pseudo : _no_value transcript_id : XR_034669.1

name	LOC665743 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149267283 GeneID:665743
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 8 Proteins product : similar to glyceraldehyde-3-phosphate-dehydrogenase pseudo : _no_value transcript_id : XR_033879.1

name	4933404G15Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149267405 GeneID:74066 MGI:1921316
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA 4933404G15 gene transcript_id : XR_035436.1

clone name	MSMg01-384B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380N21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-311H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089D23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-233O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477K13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-155F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053F05
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-477K13.T7 (MSMg01no477_k13.b1)	MSMg01-477K13.TJ (MSMg01no477_k13.g1)
ACC	AG558958	AG558959
length	753	823
length of high quality (start - end)	675 (47 - 721)	---
definition	CHROMAT_FILE: MSMg01no477_k13.b1 PHD_FILE: MSMg01no477_k13.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:57:09 2005	CHROMAT_FILE: MSMg01no477_k13.g1 PHD_FILE: MSMg01no477_k13.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:57:10 2005
singlet/doublet	singlet	---
BLAST hit	plural	no hit data
sequence	GCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG GAATTCTCTAAACTCACTACTATACACATCATTACCTCTACATTGATACT CAAGTCCTTTATTATAAAAACCTATGGATGGACTTATAAAAGATGGTACC TGTTGCGGACAGCCAGCGGCCCACATGTCTGGGTTCTAGCCTGGGAGGCA TTCTGGAATCTGAAAGAGAAGAGGGAGCTAGGTGGCGGGAGAGAGAATGG AACCAAGACAACTAGTCTGCTCAAGGTTCAATTTTACTATTCCCAGACAC TCGGTTATGAAGAAGTGGGAGGTGCCCATTCCCGCCAAATCATCCTTGGA ATCCAGTTTCAGGTGACCACGTGATAGCTCCGGAACAGCTAGGCGGCAGG CAGTAGCAGTGGGAGTGACAGAACGATAGGTGTGGCAGGCTCCACCCCAG GTGCTCTCTTCCTGCTAACAGTGAAACCTGTTTAGCCAGGTTTCAGGCTG AGGGGGGGAGGTTGTTTGACACTCCAATGGGCTGTCTTTAGTGGACGAGG CATTTTTTCCCATTTTGGAGGGATAGAACATGGCAAGTCCAGAACATAAG TAATAGGATAGGAGGCAAACTTTTATGTTCATCAAAGCTTGGAGAACGTA ATAATAGTGGAAATGTATTCAAAGTGTACACTGATGAAATTCCTTATTTT CAACAACTATTTCATACTAGCAAAGTGTTTAAAATCTGAAAAATTAAATT TAA	ACAGAAAAGGTGGGGGTGGGGGGTGTCTTTGAGTTTGGTGGAGAGTGTTT TCCCCTGTGGCGTGCCCTCGCCCGCGTTCTTAACGCGCGCTCCGCCTTTT ACCTCACCATTAGCCCGGTTTCCGTGGGTTTTGACGGATCACAGGACGAT TGGGCCCCCTCTCGCTTCGCGGTCCGTTTTTACGCGGTTTCTCGTAGCGG CGTCGCCCGTCCATAATTTGCTTTGATTCGAGTGTGCACGCTTTTTTCCG GCACTACCCGGTATGAGCCGATATTCGCAGTAGTTGTGCGGCGGTGTCGG GAATTGTTGTAAGTACGCGATAAGTATATTTTTCCGCTGTTATGTGCTCC CTTTTTTGGCCCATCTTCTGCCTCTCCCCTTTCTCTATTTTCTTTCCACC CCTATTTTCTCCGCCCGTTTCCCCGCTGTTTTTCTCGTTAGTACCGAACT TACTCAATCTTTCCTTTAGGGCCGTCTCTCACCGTCGTGCAAGCGCAGCC CCTCTCCCATTTTGGGTTTATCTCCGCGTACTCGTAACAATTGGATGTCT GGATTGGAGGTGCGCGGGTACCCCGATTTGATGTTACCAAATGGAGCGTC GCGCGACCAACACCCATGGAGTAGTTATCATCCTCGCATTCCCCCCACTG ACACCCGACGTGCGCTTGTTTGTACTCGCTCCCTCAGAAGCACAACGTTA TGGTTTTGTTATTGTTCCGGGCGCGCGTGCTCGTCTTCTTCCCATTTTTA TGCCCGTGCCCGCCACCTCCTCCTATTTTCTTTAATTTTTCCGGTGGCGT CACATTGTTACACCGCTTCTGTG
quality values	Open. Hide. 9 9 11 11 11 12 12 19 24 19 21 23 16 16 15 15 16 24 25 30 20 19 19 21 32 37 28 22 24 20 18 16 18 9 9 9 9 9 9 9 11 10 10 12 17 17 30 34 35 43 23 16 16 16 17 23 43 44 21 19 9 9 9 9 9 9 11 19 25 37 39 46 33 33 33 33 30 30 36 36 36 36 42 57 57 57 57 57 50 50 48 50 50 53 53 68 68 43 51 43 43 43 43 51 68 68 68 68 68 50 50 50 50 47 51 51 68 68 68 68 68 68 68 68 54 47 42 41 41 40 47 57 68 68 53 53 53 53 53 57 32 29 18 21 21 42 33 42 53 57 57 53 53 50 50 50 50 42 41 39 39 39 39 41 44 44 59 39 39 32 32 37 37 47 47 47 50 50 50 50 53 53 53 50 53 53 53 50 50 59 59 59 37 37 30 30 25 31 39 44 44 37 37 50 41 30 27 36 30 35 35 53 53 53 53 53 57 53 53 53 53 53 53 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 48 48 41 41 41 41 48 57 57 57 44 44 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 53 59 59 59 59 48 48 59 59 59 59 59 59 59 59 59 53 50 50 41 37 32 28 19 18 12 12 12 15 19 32 34 41 41 59 59 59 59 59 59 59 59 57 57 57 57 57 57 59 59 59 59 53 53 53 53 54 54 57 57 57 57 57 57 54 57 57 57 57 57 54 48 48 57 57 68 68 54 57 57 57 59 59 59 68 68 57 57 57 57 47 47 57 57 54 54 57 57 57 59 59 48 48 48 48 48 59 59 54 54 54 57 57 57 59 59 59 59 59 57 57 57 57 54 54 57 57 57 57 57 59 57 57 59 59 68 59 59 59 59 54 54 54 59 57 59 57 59 59 68 57 57 57 43 43 50 59 59 68 68 68 68 68 68 68 59 59 57 57 57 57 57 57 57 57 59 59 57 57 57 57 57 57 57 57 57 57 54 54 57 57 57 57 57 59 59 59 59 48 48 59 57 48 48 40 40 40 48 59 59 48 48 48 48 48 48 48 54 48 59 48 48 48 47 47 47 48 48 48 57 57 57 59 59 59 59 59 59 59 59 59 59 47 36 36 37 31 35 39 39 41 41 40 40 46 48 48 48 48 48 48 48 46 46 46 41 33 33 32 30 26 29 35 28 28 39 39 37 30 30 37 37 37 37 37 37 36 43 31 28 35 32 32 23 20 20 26 27 39 39 37 37 30 37 37 47 34 34 28 16 16 23 23 25 20 31 39 37 37 38 39 41 43 41 37 32 34 31 28 28 34 34 40 34 30 19 19 19 18 18 24 27 27 28 34 37 37 37 33 37 37 37 37 43 43 41 37 29 37 37 37 32 29 32 32 37 39 39 39 39 34 30 26 17 17 24 31 59 37 39 40 40 47 37 36 33 27 25 25 22 26 30 34 34 24 13 12 14 14 32 37 41 43 37 35 25 27 30 25 17 25 19 23 28 28 30 35 35 35 34 25 22 11 11 11 15 12 20 24 28 14 9 9 15 11 11 12 14 14 16 23 28 25 24 22 22 30 32 33 32 25 25 32 29 29 29 29	Open. Hide. 11 11 11 11 11 8 8 8 8 8 8 9 9 8 8 8 8 8 8 10 9 8 8 8 8 8 8 8 6 8 6 6 6 6 6 6 9 9 9 9 9 9 9 9 10 11 9 12 11 12 12 12 11 11 9 8 8 8 8 8 8 6 8 8 8 8 10 8 12 8 8 8 8 8 8 10 10 8 10 10 9 8 8 8 10 8 10 9 9 9 9 8 10 13 12 12 10 13 13 8 8 8 10 18 19 13 12 12 8 10 6 6 8 8 8 8 11 13 9 9 9 8 8 8 6 6 8 8 12 8 8 8 8 8 8 9 9 8 9 10 8 8 8 8 6 6 8 8 11 12 12 8 8 8 8 8 8 8 11 9 8 8 8 8 8 9 8 11 10 10 8 8 8 8 8 6 6 10 10 11 8 8 8 8 8 8 8 10 9 10 9 9 9 13 12 11 11 11 8 8 8 8 8 8 8 8 8 10 6 6 8 8 10 8 8 8 8 8 8 13 10 8 8 8 8 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 13 10 8 8 8 8 8 8 8 9 8 8 10 10 8 9 12 11 11 11 9 9 8 8 8 8 8 8 8 8 8 9 11 11 10 10 10 10 10 8 6 6 7 10 10 13 8 8 6 8 6 6 8 6 8 8 8 8 8 8 8 6 6 8 6 6 8 8 8 8 8 8 10 8 8 10 10 10 10 16 9 8 8 8 10 10 10 10 10 8 8 8 8 8 8 8 8 8 8 6 6 8 8 8 8 9 9 9 8 8 8 8 8 8 10 8 8 6 6 6 6 11 11 10 9 9 11 11 11 14 14 14 8 10 6 6 8 8 11 9 10 9 9 9 9 8 8 8 8 10 8 10 10 10 13 15 15 22 12 11 11 8 8 9 9 10 10 8 9 10 8 8 7 7 14 11 11 10 10 8 8 8 8 8 8 10 13 13 10 10 10 10 11 8 8 6 6 8 8 9 11 8 8 8 8 8 8 8 8 8 8 8 8 8 10 11 12 18 11 8 8 8 8 8 10 10 10 10 10 10 10 10 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 9 9 8 10 8 8 8 8 8 8 11 6 6 6 6 8 8 8 8 6 6 8 8 10 8 8 8 8 8 8 10 11 11 11 10 10 10 10 10 10 8 8 8 8 8 8 8 8 8 8 11 10 10 10 8 8 8 8 8 8 8 6 6 8 8 10 10 8 8 6 6 8 8 10 8 7 6 8 8 8 8 8 8 8 8 8 8 8 8 8 9 10 10 8 8 8 8 8 8 8 8 6 6 6 6 8 8 11 8 8 6 6 8 8 8 6 8 8 8 8 8 10 10 10 13 13 8 8 8 8 8 8 12 15 19 23 15 13 10 10 10 10 9 9 9 9 7 7 8 8 8 7 7 8 8 8 8 8 8 10 8 9 11 10 6 8 6 6 8 8 10 9 10 10 7 6 6 6 8 8 8 8 8 10 10 9 8 8 8 8 8 10 8 6 6 6 6 10 11 8 8 8 8 8 8 9 9 10 10 13 16 15 12 12 9 9 9 8 8 8 8 6 6 6 6 8 8 8 10 10 11 11 9 10 10 10 10 13 10 10 10 10 9 9 9 11 8 8 8 8 8 8 9 12 10 11 10 10 10 10 10 8 8 8 10 10 8 6 6 6 8 8 9 10 10 10 11 9 9 12 12 13 10 8 8 8 8 6 6 8 8 11 12 12 8 8 8 8 8 6 11 10 8 7 6 8 8 8 8 8 8 8 8 8 8 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no477_k13.b1 MSMg01no477_k13.b1 CHROMAT_FILE:
MSMg01no477_k13.b1 PHD_FILE: MSMg01no477_k13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:09 2005
         (675 letters)



>mm_chr16_16366938_16368013
          Length = 1076

 Score =  696 bits (360), Expect = 0.0
 Identities = 420/444 (94%), Gaps = 8/444 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctaaa-ctcactactatacacatcattacctctacattgatactcaagtcctt 63
           |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 205 gaattctctaaaactcactactatacacatcattacctctacactgatactcaagtcctt 264

                                                                       
Query: 64  tattataaaaacctatggatggacttataaaagatggtacctgttgcggacagccagcgg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 265 tattataaaaacctatggatggacttataaaagatggtacctgttgcggccggccagcgg 324

                                                                       
Query: 124 cccacatgtctgggttctagcctgggaggcattctggaatctgaaagagaagagggagct 183
           |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 325 cccacatgtctgggttctagcctgggaggcatcctggaatctggaagagaagagggagct 384

                                                                       
Query: 184 aggtggcgggagagagaatggaaccaagacaactagtctgctcaaggttcaattttacta 243
           ||| |||  ||||||||| |||||||||||||       |||||||||||||||||||||
Sbjct: 385 aggcggctcgagagagaaaggaaccaagacaa-------gctcaaggttcaattttacta 437

                                                                       
Query: 244 ttcccagacactcggttatgaagaagtgggaggtgcccattcccgccaaatcatccttgg 303
           ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 438 ttcccagacactcggttatgaagaagtgggaggggcccattcctgccaaatcatccttgg 497

                                                                       
Query: 304 aatccagtttcaggtgaccacgtgatagctccggaacagctaggcggcaggcagtagcag 363
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 agtccagtttcaggtgaccacgtgatagctccggaacagctaggcggcaggcagtagcag 557

                                                                       
Query: 364 tgggagtgacagaacgataggtgtggcaggctccaccccaggtgctctcttcctgctaac 423
           |||||||| ||||| |||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 558 tgggagtggcagaatgataggtgtggcaggctccaccccaggtgctcgcttcttgctaac 617

                                   
Query: 424 agtgaaacctgtttagccaggttt 447
           ||||||||||||||||||||||||
Sbjct: 618 agtgaaacctgtttagccaggttt 641


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1076
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1066
Effective search space:   708890
Effective search space used:   708890
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information