Query= MSMg01no477_o05.b1 MSMg01no477_o05.b1 CHROMAT_FILE:
MSMg01no477_o05.b1 PHD_FILE: MSMg01no477_o05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:27 2005
(401 letters)
>mm_chr16_50464144_50464944
Length = 801
Score = 721 bits (373), Expect = 0.0
Identities = 394/401 (98%)
Strand = Plus / Plus
Query: 1 tgacaataaagacaagataatttaaaaaaatttatacacaaaacattttttttaacaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgacaataaagacaagataatttaaaaaaatttatacacaaaacattttttttaacaaag 260
Query: 61 tgaataatcaaagtataagcttatctggaaaaagattgtcatttacatggataaaacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaataatcaaagtataagcttatctggaaaaagattgtcatttacatggataaaacaaa 320
Query: 121 ctatgctcatcgatatagttatgaaataattgaagattgctttaattggacttcaggctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 321 ctatgctcatcgatatagttatgaaataattgaagattgctttaattggactttagactg 380
Query: 181 ctttgagggattctttttcctaccacccttccaaccaactctcagaactaggtaggagag 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttgggggattctttttcctaccacccttccaaccaactctcagaactaggtaggagag 440
Query: 241 aaagtgggctagaagggaaatggggcatctgtgggtcaggtagattacttcctgctgatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagtgggctagaagggaaatggggcatctgtgggtcaggtagattacttcctgctgatt 500
Query: 301 ggagatcttccttggagcagggttgatctctgttgtcaggatatttaattcccccttctc 360
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 501 ggagatcttccttggagcagggttgatctctgttgtcaggatatttaatttcttcttctc 560
Query: 361 tttttgtgcaccaccacttgacaaaccaccaccacaagaat 401
||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttttgtgcaccaccacttgacaaaccaccaccacaagaat 601
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_o05.g1 MSMg01no477_o05.g1 CHROMAT_FILE:
MSMg01no477_o05.g1 PHD_FILE: MSMg01no477_o05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:27 2005
(114 letters)
>mm_chr16_50683147_50683658
Length = 512
Score = 182 bits (94), Expect = 6e-51
Identities = 109/114 (95%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 1 caggacatccagggctgttaacacagagaaggctagctcaaaaaccaaaaccaaaaccaa 60
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 312 caggacatccagggctgttaacacagagaaggttagctcaaaaaccaaaaccaaaaacaa 253
Query: 61 acaaacaaaaaaacatactggatgaaataaatatttgctgagataaaagaaacc 114
|||||||||||||||||||| ||||||||||||||| ||||||||| |||||||
Sbjct: 252 acaaacaaaaaaacatactg-atgaaataaatattt-ctgagataagagaaacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 114
Length of database: 512
Length adjustment: 8
Effective length of query: 106
Effective length of database: 504
Effective search space: 53424
Effective search space used: 53424
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
