XXXXXXXXXXXXXXXXXXXXXXTCCCAGAGGAGCCGCGGAATTCTTTGAT
TCCCAAAGCTAGAGTTCTGATTTAAATGAAAGTTTTACGACAGCAATAAT
TCTAAAATTCTGGACGGTCCATTTTGGACTGCAGAGCATGCATGATCCTT
TGGAGAGACATTTGAAGCCAAGTTTGTAGGTTTTATTCCACTTAGCAGTT
TTGAAGATAGCATTATTGTTTATGGAGTTTAACTCATGGATGATTGTGTG
ATTGTACAAAATATGGTAAGATGATGAGGTGGGTGTTTGTTTGTTTACTC
ATTTGAATTCTTAGACGGCTGACCCAGAAAGTTCCACTTAAATCAGAAGG
AGATACATGCACATAAGGTTATAATTTCTAATCCTGCCTGATTAGTACAT
CAACAGGATACCAAGCATCAAAACATATGAGCTGATGGGGGCCATTCTCC
TTTAGACAATCATAGTAAGCATCCCAAAAGGTATTTTCGAAACAAACACG
TTGCCTGTTTAGTCTTTTCGTCAAATATGTGGTTGTTTCTTTTCTTTTTA
TTGTTTTGCTAGGAATTAAGACTAAGGTCTCATGAATGCTAGAGAAGATA
ACATATAACATTGATTAAATCCCTAGTTCAGCATAAGGATTTTAATGCAA
AGCTAAATATATTAAATTTTATTATTATATGAAATTTTTTTTGTTAAAAT
GGAGAANAGTTATGATCAAAGCTGTGATTTAGTAAACTTACTGTAGGCTC
AT

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXATGGGACCAAGGGCTTCTCCTCCCATTGATGCCCAAC
AAGGCCATTCTCTGCTACATATGCAGCTAGAGCCATGGATTCCTCCATGT
GTACTCCTTGGTTGGTGGTTTAGACCCTGAGAACTCTGGTTGGAGGATAT
TGCAGTTCTGCTTATGAGGTTGCAAAATCCTTCAGTTCCTTCAGTCCTTT
AACTCCTCCATTGGGGACCCCGTGATCAGTCCAATGGTTGACTGCGAGCA
TCCACCTCTGTATTTGTCAGGTACTGGCGGAGCCTCTCAGGAGACACTCA
TATCAGGCTCCTGTCAGAATGCACTTCTTGGCATCCACAACAGTATCTGG
GTTTGGGGACTTTATATGGGATGGATCTCCAGGTGGGGCAGTCTCTGGAT
GGCCTTTACTTCACTCTCTGCTCCACACTGTGTCTCAGTATTTTCTCCCA
TTAGTATTTTGTTATCACTTTAAAGGAGGACGGAAGCACCCACACTTTGG
TTTTCCTTCTTCTTGAGTTTCATGTGGTCTATGAATTTTATCTTGTGTAT
TTCCACCTTAGGGCTAATATCCACTTGTCAGTGACTTCATAGCATGTGTG
TTTTGTGATTAGGTTACCTCCCTCAGGATGATATTTTCTAGTTCCATCCA
TTTGCCTAAGAATTTAATGAAATCATCCTCTGTTGAGTTCTTTCCAGTTN

Query= MSMg01no478_f13.b1 MSMg01no478_f13.b1 CHROMAT_FILE:
MSMg01no478_f13.b1 PHD_FILE: MSMg01no478_f13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:03 2005
         (664 letters)



>mm_chr16_78852642_78853705
          Length = 1064

 Score = 1205 bits (623), Expect = 0.0
 Identities = 652/662 (98%)
 Strand = Plus / Plus

                                                                       
Query: 3   agttctgatttaaatgaaagttttacgacagcaataattctaaaattctggacggtccat 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 agttctgatttaaatgaaagttttacgacagcaataattctaaaattctggacggtccat 262

                                                                       
Query: 63  tttggactgcagagcatgcatgatcctttggagagacatttgaagccaagtttgtaggtt 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tttggactgcagagcatgcatgatcctttggagagacatttgaagccaagtttgtaggtt 322

                                                                       
Query: 123 ttattccacttagcagttttgaagatagcattattgtttatggagtttaactcatggatg 182
           |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 323 ttattccacttaccagttttgaagatagcattattgtttacggagtttaactcatggatg 382

                                                                       
Query: 183 attgtgtgattgtacaaaatatggtaagatgatgaggtgggtgtttgtttgtttactcat 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 attgtgtgattgtacaaaatatggtaagatgatgaggtgggtgtttgtttgtttactcat 442

                                                                       
Query: 243 ttgaattcttagacggctgacccagaaagttccacttaaatcagaaggagatacatgcac 302
           ||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttgaaatcagagacggctgacccagaaagttccacttaaatcagaaggagatacatgcac 502

                                                                       
Query: 303 ataaggttataatttctaatcctgcctgattagtacatcaacaggataccaagcatcaaa 362
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 503 ataaggttataatttctaatcctgcctgattagtacatcaacagggtaccaagcatcaaa 562

                                                                       
Query: 363 acatatgagctgatgggggccattctcctttagacaatcatagtaagcatcccaaaaggt 422
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 563 acatatgagctgatgggggccattctcctttagactatcatagtaagcatcccaaaaggt 622

                                                                       
Query: 423 attttcgaaacaaacacgttgcctgtttagtcttttcgtcaaatatgtggttgtttcttt 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 attttcgaaacaaacacgttgcctgtttagtcttttcgtcaaatatgtggttgtttcttt 682

                                                                       
Query: 483 tctttttattgttttgctaggaattaagactaaggtctcatgaatgctagagaagataac 542
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tctttttattgtttttctaggaattaagactaaggtctcatgaatgctagagaagataac 742

                                                                       
Query: 543 atataacattgattaaatccctagttcagcataaggattttaatgcaaagctaaatatat 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 atataacattgattaaatccctagttcagcataaggattttaatgcaaagctaaatatat 802

                                                                       
Query: 603 taaattttattattatatgaaattttttttgttaaaatggagaanagttatgatcaaagc 662
           ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 803 taaattttattattatatgaatttttttttgttaaaatggagaaaagttatgatcaaagc 862

             
Query: 663 tg 664
           ||
Sbjct: 863 tg 864


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)