Query= MSMg01no478_h15.b1 MSMg01no478_h15.b1 CHROMAT_FILE:
MSMg01no478_h15.b1 PHD_FILE: MSMg01no478_h15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:12 2005
(426 letters)
>mm_chr16_22234371_22235194
Length = 824
Score = 698 bits (361), Expect = 0.0
Identities = 410/427 (96%), Gaps = 4/427 (0%)
Strand = Plus / Plus
Query: 1 ttgttgtgaggcagggtgtctccttgttcgagttgcactgtggatgttgcacccaccctg 60
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 ttgttgtgagtcagggtgtctccttgttccagttgcactgtggatgttgcacccaccctg 260
Query: 61 gacgtaacgtccattatcgtggagataatggcctgcatgcttctggacaattctatctct 120
||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 261 gacgtgacgtccattatcgtgcagataatggcctgtgtgcttctggacaattctatctct 320
Query: 121 acctcccatctccctggaagaagggtgggattacacatgcctgcggtcatacccagattt 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 acctcccatc--cctggaagaagggtgggattacacatgcctgcggtcatacccagcttt 378
Query: 181 cttcttttttaaatgtgggtgccagaggtcaaaccaggccatcaggtttccatagcaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 379 cttcttttttaaatgtgggtgccagaggtcaaaccaggccatcaggtttccatggcaaca 438
Query: 241 cgcattcccagggagcagctcagcagctcctggttttgtttctcaacatctacaactgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cgcattcccagggagcagctcagcagctcctggttttgtttctcaacatctacaactgta 498
Query: 301 aagttttgtttcttc-tttcgtcatttttgttttgtgtttgtaaatctgtcatacttcat 359
||||||||||| ||| ||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 499 aagttttgttt-ttccttttgtcagttttgttttgtgtttgtaaatctgtcatacttcat 557
Query: 360 ccatacagtaactgcattctttttacaaactgaccatttattctaataaaatgcctgtgt 419
|| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ccgtacagtaactgcattctccttacaaactgaccatttattctaataaaatgcctgtgt 617
Query: 420 ctacaat 426
|||||||
Sbjct: 618 ctacaat 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 824
Length adjustment: 9
Effective length of query: 417
Effective length of database: 815
Effective search space: 339855
Effective search space used: 339855
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_h15.g1 MSMg01no478_h15.g1 CHROMAT_FILE:
MSMg01no478_h15.g1 PHD_FILE: MSMg01no478_h15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:12 2005
(395 letters)
>mm_chr16_22442071_22442864
Length = 794
Score = 710 bits (367), Expect = 0.0
Identities = 388/395 (98%), Gaps = 1/395 (0%)
Strand = Plus / Minus
Query: 1 aagcagccaggcttggggcctcctttcctcccttcccctcgccctcattgcctcctctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 aagcagccaggcttggggcctcctttcctcccttcccctcgccctcattgcctcctctaa 535
Query: 61 ctgaggctgcaaactgaacgtggtgaaaaacacgcgtctagtttctcattgtgaccgagt 120
|||| |||||||||||||| ||||||| |||| |||||||||||||||||||||||||||
Sbjct: 534 ctgacgctgcaaactgaacttggtgaagaacaggcgtctagtttctcattgtgaccgagt 475
Query: 121 tttgctactgcccaaggacaaaggctagattgacacaagaagaatgtcccaggaggtggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 474 tttgctactgcccaaggacaaaggctagattgacacaagaagaatgtcccagggggtggg 415
Query: 181 cctcttttttgtttccttttccaaaactgtttctctcctggaggggaaggaatgataatt 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 cctc-tttttgtttccttttccaaaactgtttctctcctggaggggaaggaatgataatt 356
Query: 241 agagcacttgttctacaaatcccctatgtaaatatgttcttaggagcggagatccagcgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 agagcacttgttctacaaatcccctatgtaaatatgttcttaggagcggagatccagcgc 296
Query: 301 attagactagaaacctctcgtattacccttaactctcctatctggcagagataacaagag 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 attagactagaaacttctcgtattacccttaactctcctatctggcagagataacaagag 236
Query: 361 aaagacagtgggatgtgaatggggatagagaagca 395
|||||||||||||||||||||||||||||||||||
Sbjct: 235 aaagacagtgggatgtgaatggggatagagaagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 794
Length adjustment: 9
Effective length of query: 386
Effective length of database: 785
Effective search space: 303010
Effective search space used: 303010
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
