XXXXXXXXXXXXXXXXXXXXXXXATTTCAGAGAGGAGGCGCGGAATTCCA
GTCTTACAAAAAAGAGTATTCTATTGAAAACTAGGAAACTGTCTGGGGTG
ATGGGGGAAAGACTTAACTTCTTGAAAACTCTTCTCTTAAAAGTGAAAAA
AATAGCAATTGCTCCAGCAGTTGAACAAAGCATACGAAGCAAAGAAAACA
CAGAGAGCAAGGGGAATCCCTGCTCTCAGAAATGGACACTATTTATAGAT
CTTGTTGTCTTTTGTTCTCTTACGGGGATTCAAGATTCTGTCACACTTTT
CTTGACCTTGGATAATTCTGGCATTTTGTTGTTGTTGTCAGTTTATCTAG
AGTGTACTCACTAGTTACTAAAACCACTTGGCTAAAAACAAAAGCATCTT
GGGGTTCACCGGAATGTAGCACAGAGCAGGATTGACAGATCGATGCAGGG
ATGGAAGCAAGAAAGGTTCTAGAAATTCTCATATAAAGCCTGGCATCCCA
AGCCCCCCTTTCTTCTGCCATTTTGAAGGGCACCAGCACAATGGCAGCAC
AAGTTCAAGCAAGCTCTAATTCCTTTGCAGTCTTCCCTAAGCCCCCATAC
CATTGTCAACTCTCTAAGCAAAGATTCTTGCTCATCACTGCCATTCAGTA
TTCTTTCCTGATATGTTCTGAGATTTTAATTTTGTTGAGACTAAGAACTG
TATCTAGCCAGATGGAGCTCTCAAACTCTGGAGGC

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXGAGGAAGGCATTGGTGTCTTCCTTCCC
ATCCTCCAGCAGCTTGCAAAGCATCTTCTGGCGCTCTAAAAGCTAGAGAG
CAGTGGGGAAGTTTCCTAATCAGTTTGAGGTTGATCTCCCTGTGTCACAT
AGACAAAGTGTGACATCTTCAGCAATGGGGTGTCACTACACAGTTAGGGA
AGGTAACAGATTGTGCTGTCTTGGATGTGGCCTTCTTGATCCATAACTCA
AACACAGATATCTGAGGCCCTCGGCTTCAATTTTCACCTAACAACTTGTA
TCTTCTACATTGTTTACATAATTAAAAGTTGAAGAATTACGAGGACAAAT
AGAAATGATGTGTGGTAGTAATGACTGAGAATCATTACTTCCTTTATAAG
ATTGTACATAAACATTATTTCTTTGAAAGCTTTCCCTAAAGCCATTCCTA
GACCATCTCTATCCTTGCTAAGAAAGGCATCTAAATTCACAGTTCCCAGT
TAAACACAGCCCTTATTTACTTCATGACCTCTGTAGTCTTGACTTTTGCC
CTACCTGTTACCCTGGAAACATATTGCAGTTCCAGACACTGATGATCTCT
CAGTCACTCACGCCTGAGGCGTCACTTTGCCATCAACCTCCCAGTACACC
TCTTTCCTGCACAGCACCGCCACTCAGCTTAGTGACAGCN

Query= MSMg01no478_n09.b1 MSMg01no478_n09.b1 CHROMAT_FILE:
MSMg01no478_n09.b1 PHD_FILE: MSMg01no478_n09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:38 2005
         (418 letters)



>mm_chr16_55456044_55456861
          Length = 818

 Score =  785 bits (406), Expect = 0.0
 Identities = 415/418 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctggcattttgttgttgttgtcagtttatctagagtgtactcactagttactaaaaccac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggcattttgttgttgttgtcagtttatctagagtgtactcactagttactaaaaccac 260

                                                                       
Query: 61  ttggctaaaaacaaaagcatcttggggttcaccggaatgtagcacagagcaggattgaca 120
           ||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||
Sbjct: 261 ttggctaaaaacaaaagcatcttggggtttagtggaatgtagcacagagcaggattgaca 320

                                                                       
Query: 121 gatcgatgcagggatggaagcaagaaaggttctagaaattctcatataaagcctggcatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatcgatgcagggatggaagcaagaaaggttctagaaattctcatataaagcctggcatc 380

                                                                       
Query: 181 ccaagcccccctttcttctgccattttgaagggcaccagcacaatggcagcacaagttca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaagcccccctttcttctgccattttgaagggcaccagcacaatggcagcacaagttca 440

                                                                       
Query: 241 agcaagctctaattcctttgcagtcttccctaagcccccataccattgtcaactctctaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcaagctctaattcctttgcagtcttccctaagcccccataccattgtcaactctctaa 500

                                                                       
Query: 301 gcaaagattcttgctcatcactgccattcagtattctttcctgatatgttctgagatttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcaaagattcttgctcatcactgccattcagtattctttcctgatatgttctgagatttt 560

                                                                     
Query: 361 aattttgttgagactaagaactgtatctagccagatggagctctcaaactctggaggc 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aattttgttgagactaagaactgtatctagccagatggagctctcaaactctggaggc 618


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space:   330881
Effective search space used:   330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no478_n09.g1 MSMg01no478_n09.g1 CHROMAT_FILE:
MSMg01no478_n09.g1 PHD_FILE: MSMg01no478_n09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:38 2005
         (663 letters)



>mm_chr16_55617348_55618410
          Length = 1063

 Score = 1251 bits (647), Expect = 0.0
 Identities = 659/663 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    gaggaaggcattggtgtcttccttcccatcctccagcagcttgcaaagcatcttctggcg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 gaggaaggcattggtgtcttccttcccatcctccagcagcttgcaaagcatcttctggcg 988

                                                                        
Query: 61   ctctaaaagctagagagcagtggggaagtttcctaatcagtttgaggttgatctccctgt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987  ctctaaaagctagagagcagtggggaagtttcctaatcagtttgaggttgatctccctgt 928

                                                                        
Query: 121  gtcacatagacaaagtgtgacatcttcagcaatggggtgtcactacacagttagggaagg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927  gtcacatagacaaagtgtgacatcttcagcaatggggtgtcactacacagttagggaagg 868

                                                                        
Query: 181  taacagattgtgctgtcttggatgtggccttcttgatccataactcaaacacagatatct 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867  taacagattgtgctgtcttggatgtggccttcttgatccataactcaaacacagatatct 808

                                                                        
Query: 241  gaggccctcggcttcaattttcacctaacaacttgtatcttctacattgtttacataatt 300
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 807  gaggccctcggcttcaattttcacctaacaacttgtatcttctacattgtttacctaatt 748

                                                                        
Query: 301  aaaagttgaagaattacgaggacaaatagaaatgatgtgtggtagtaatgactgagaatc 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747  aaaagttgaagaattacgaggacaaatagaaatgatgtgtggtagtaatgactgagaatc 688

                                                                        
Query: 361  attacttcctttataagattgtacataaacattatttctttgaaagctttccctaaagcc 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687  attacttcctttataagattgtacataaacattatttctttgaaagctttccctaaagcc 628

                                                                        
Query: 421  attcctagaccatctctatccttgctaagaaaggcatctaaattcacagttcccagttaa 480
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 627  attcctagaccatctctatccttgctaagaaaggcatctaaattcccagttcccagttaa 568

                                                                        
Query: 481  acacagcccttatttacttcatgacctctgtagtcttgacttttgccctacctgttaccc 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567  acacagcccttatttacttcatgacctctgtagtcttgacttttgccctacctgttaccc 508

                                                                        
Query: 541  tggaaacatattgcagttccagacactgatgatctctcagtcactcacgcctgaggcgtc 600
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507  tggaaacgtattgcagttccagacactgatgatctctcagtcactcacgcctgaggcgtc 448

                                                                        
Query: 601  actttgccatcaacctcccagtacacctctttcctgcacagcaccgccactcagcttagt 660
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 447  actttgccatcaacctcccagtacacctctttcctgcatagcaccgccactcagcttagt 388

               
Query: 661  gac 663
            |||
Sbjct: 387  gac 385


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space:   687609
Effective search space used:   687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)