Query= MSMg01no479_j05.b1 MSMg01no479_j05.b1 CHROMAT_FILE:
MSMg01no479_j05.b1 PHD_FILE: MSMg01no479_j05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:38 2005
(638 letters)
>mm_chr16_73668526_73669563
Length = 1038
Score = 1137 bits (588), Expect = 0.0
Identities = 625/638 (97%), Gaps = 2/638 (0%)
Strand = Plus / Plus
Query: 1 atttgagtggaggaacataaaatatatgaacacatctcaaatgtcatatggggcgctata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttgagtggaggaacataaaatatatgaacacatctcaaatgtcatatggggcgctata 260
Query: 61 tattttatcagtatacatgtaatccttaccttacataattacacacatgtgattcatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattttatcagtatacatgtaatccttaccttacataattacacacatgtgattcatgaa 320
Query: 121 cctagtgaatattatattttatttagatccttagtcattgatagaaaataaacttagtat 180
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 cctagtggatattatattttatttagatccttagtcattgataggaaataaacttagtat 380
Query: 181 gattttaataattttgaactgtacagtaaaggtcttttttaaattaattttagaaaaaaa 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 gattttaataattttgaactgtacagtaaaggtctttttaaaattaattttagaaaaaaa 440
Query: 241 taaattccaagaggtcatgaaaaaaaacagtcaacagaagatagaattccagtaaatagg 300
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 441 taaattccaagaggtcatgaaaataaccagtcaacagaagatagaattccagtaaatagg 500
Query: 301 taaagcaggacaactctctggtattagtacataaattcatgttgaattgctctcaggttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaagcaggacaactctctggtattagtacataaattcatgttgaattgctctcaggttt 560
Query: 361 atctagaatattttgtgtatgactggcaacagaaaaaaatgatgcagctttaaaaagtaa 420
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 561 atctagaatattttgtgtatgactggcaacagaaaaag--gatacagctttaaaaagtaa 618
Query: 421 atgtgcatttaaaaaatctgtccacaatggatagaagtaccttcttaacactatgactaa 480
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 619 atgtgcattttaaaaatctgtccgcaatggatagaagtaccttcttaacactatgactaa 678
Query: 481 tgatgtaatatgctaaaagttaaatgtgatgagttgaacaactactgataagaaatataa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tgatgtaatatgctaaaagttaaatgtgatgagttgaacaactactgataagaaatataa 738
Query: 541 tagcctgtacctttgcccagtgaagttttaatagttacagaacagatgttttaatgggta 600
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tagcttgtaccttggcccagtgaagttttaatagttacagaacagatgttttaatgggta 798
Query: 601 aaaatgagctaattagtacagatttttagatttacata 638
||||||||||||||||||||||||||||||||||||||
Sbjct: 799 aaaatgagctaattagtacagatttttagatttacata 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_j05.g1 MSMg01no479_j05.g1 CHROMAT_FILE:
MSMg01no479_j05.g1 PHD_FILE: MSMg01no479_j05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:38 2005
(618 letters)
>mm_chr16_73807983_73809000
Length = 1018
Score = 629 bits (325), Expect = 0.0
Identities = 379/399 (94%), Gaps = 4/399 (1%)
Strand = Plus / Minus
Query: 224 tcaatgagaggagaggcccttgatcctgagaaggcttgatttcccagtgtaagggaatgc 283
|||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||
Sbjct: 1018 tcaatgagaggagaggcccttgatcctgagaaggtttgatcccccagtgtaggggaatgc 959
Query: 284 caggacagggaagcaaaagtgggtgagttggtgagtcggagagtggcgatgggatagagg 343
||||||||||||||||||||||||||||||||||| | | |||||||||||||||||| |
Sbjct: 958 caggacagggaagcaaaagtgggtgagttggtgagccagtgagtggcgatgggatagaag 899
Query: 344 gtttttggaggggaacccaggaaagggaataatatttgaaatgtaaagaaagaaagtatc 403
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 898 gtttttgggggggaacccaggaaagggaataatatttgaaatataaagaaagaaagtatc 839
Query: 404 taataaaaa----aaagaaagatagcatcttgtttttgaggaaagggaatgcacttgctg 459
||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 838 taataaaaaaaagaaagaaagatagcatcttgtttttgaggaaaggggatgcacttgctg 779
Query: 460 taggtttgctcatactgagagaaagtagatgatggggagaagtcagaaaatatttaagaa 519
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 778 taggtttgcttatactgagagaaagtagacgatggggagaagtcagaaaatatttaagaa 719
Query: 520 cctatgctaaatgtcaacgggtggttacaatgcacatttgataccagcttcaaagcaaac 579
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 718 cctatgctaaatgtcaacaggtggttacaatgcacatttgataccagcttcaaaacaaac 659
Query: 580 tagatcataaagttaatgatcggcaacagtggactgatg 618
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 658 tagatcataaagttaatgattggcaacagtggactgatg 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
