Query= MSMg01no479_p06.b1 MSMg01no479_p06.b1 CHROMAT_FILE:
MSMg01no479_p06.b1 PHD_FILE: MSMg01no479_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:07 2005
(258 letters)
>mm_chr16_4911964_4912621
Length = 658
Score = 474 bits (245), Expect = e-138
Identities = 254/257 (98%)
Strand = Plus / Minus
Query: 2 cgcccactgcactgaggtcccgcccactgcactgaggtcccgcccactgcactgaggtcc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 458 cgcccactgcactgaggtcccgcccactgcactgaggtcccgcccactgcactgaggccc 399
Query: 62 tcacctcctctggagtagctccaaagcacctgcccagagtccagggctcatctgctatgg 121
||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 398 tcacctcctctggagcagctccaaagcacctgcccagaatccagggctcatctgctatgg 339
Query: 122 tagctcctcccaggacaactcagaaacaggagctcttcccaactgtcatcatactggaag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tagctcctcccaggacaactcagaaacaggagctcttcccaactgtcatcatactggaag 279
Query: 182 cccagagaggctagcacagcacacgggtcatactgcctgtagcaggttggtagttcaccc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 cccagagaggctagcacagcacacgggtcatactgcctgtagcaggttggtagttcaccc 219
Query: 242 cagggcttgtgctggcc 258
|||||||||||||||||
Sbjct: 218 cagggcttgtgctggcc 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 6
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 258
Length of database: 658
Length adjustment: 9
Effective length of query: 249
Effective length of database: 649
Effective search space: 161601
Effective search space used: 161601
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no479_p06.g1 MSMg01no479_p06.g1 CHROMAT_FILE:
MSMg01no479_p06.g1 PHD_FILE: MSMg01no479_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:07 2005
(242 letters)
>mm_chr16_4725920_4726561
Length = 642
Score = 468 bits (242), Expect = e-136
Identities = 242/242 (100%)
Strand = Plus / Plus
Query: 1 tccaggttgctcttgaattctccagcctcaaccccacccctgtcccccaccgagtgctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccaggttgctcttgaattctccagcctcaaccccacccctgtcccccaccgagtgctgg 260
Query: 61 gattccaggcttgagcccccactctcgatcaacaagcagttggctttggctgacacgctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gattccaggcttgagcccccactctcgatcaacaagcagttggctttggctgacacgctt 320
Query: 121 ccttcctctccggttaacattactactccccactcccgaagctttctcagaaggcagtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccttcctctccggttaacattactactccccactcccgaagctttctcagaaggcagtgt 380
Query: 181 cggctcgcccaagagcctcccgctagctgccgtgcgcctgggggcgtggcctggtgactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cggctcgcccaagagcctcccgctagctgccgtgcgcctgggggcgtggcctggtgactc 440
Query: 241 cg 242
||
Sbjct: 441 cg 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
