Query= MSMg01no480_b22.b1 MSMg01no480_b22.b1 CHROMAT_FILE:
MSMg01no480_b22.b1 PHD_FILE: MSMg01no480_b22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:20 2005
(627 letters)
>mm_chr16_74940202_74941228
Length = 1027
Score = 1152 bits (596), Expect = 0.0
Identities = 617/624 (98%), Gaps = 1/624 (0%)
Strand = Plus / Minus
Query: 5 gaattcacaatagtgtacacttatcaggacaaaatatatattagtccttaggaatgtaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gaattcacaatagtgtacacttatcaggacaaaatatatattagtccttaggaatgtaat 565
Query: 65 ttttattaataaaagagagatatgctgatagcattttaaaagataaaagaatagttaaga 124
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 564 ttttattaataaaagagagatatgccgatagcattttaaaagataaaagaatagttaaga 505
Query: 125 gcagactttttatatatgaaaaataatgtaattacctattcactcatatgaaataagaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gcagactttttatatatgaaaaataatgtaattacctattcactcatatgaaataagaag 445
Query: 185 aaaaaaatgcaagattattttatatgatcatcttatgacatataattatatatgttgaca 244
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 444 aaaaaaatgcaagattattttatatgatcatcttatgacatataattacatatgttgaca 385
Query: 245 tatcagtatattatcaaaaagtagatggtatcataaacctacatagtaactttaatttta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tatcagtatattatcaaaaagtagatggtatcataaacctacatagtaactttaatttta 325
Query: 305 ctttttaagttacttaataatttagccattattatatatcaattatgtcacctgagaagt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctttttaagttacttaataatttagccattattatatatcaattatgtcacctgagaagt 265
Query: 365 aataattattactttaaaagacccaaagattataaaatcatgttagagaaagttgaagtg 424
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 264 aataattattactttaaaagacccaaagattacaaaatcatgttagagaaagttgaagtg 205
Query: 425 atttatatatttaaattttaactcaatatctctctgataatttttttctcatctgttcag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 atttatatatttaaattttaactcaatatctctctgataatttttttctcatctgttcag 145
Query: 485 aattgtgtcaaaccattaaaagaacatacttaaaatgtggcagaaacagtgagtgctcac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 144 aattgtgtcaaaccattaaaagaacatacttaaaatgtggcagaaacagtgagagctcac 85
Query: 545 aatatatgtactcctttattcacagtcctgctttgcgataaa-tcatagccatgtgacca 603
||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||
Sbjct: 84 aatatatgtactcctttattcgcagtcctgctttgcgataaagtcagagccatgtgacca 25
Query: 604 gagctgcctgatagaccattagtg 627
||||||||||||||||||||||||
Sbjct: 24 gagctgcctgatagaccattagtg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_b22.g1 MSMg01no480_b22.g1 CHROMAT_FILE:
MSMg01no480_b22.g1 PHD_FILE: MSMg01no480_b22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:20 2005
(592 letters)
>mm_chr16_74757868_74758860
Length = 993
Score = 1048 bits (542), Expect = 0.0
Identities = 581/596 (97%), Gaps = 7/596 (1%)
Strand = Plus / Plus
Query: 1 ctcaggacactgagatctcaatgcaggaaggaaaacatacaatggaaaagtcaaatttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcaggacactgagatctcaatgcaggaaggaaaacatacaatggaaaagtcaaatttaa 260
Query: 61 atagatcatgaagcagcgaagaagtaaaaaatgtaacacaagagcaatttacctataatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagatcatgaagcagcgaagaagtaaaaaatgtaacacaagagcaatttacctataatt 320
Query: 121 taatcaccctgcttttttttaaa-gcaatatgtccttatttaaaagcatataagaacatc 179
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatcaccctgcttttttttaaaagcaatatgtccttatttaaaagcatataagaacatc 380
Query: 180 acataccaccctaaagtacaaagattccaaaatgtccagaaaatccttcagctgccagag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acataccaccctaaagtacaaagattccaaaatgtccagaaaatccttcagctgccagag 440
Query: 240 gtaaaacgtgtgtgtgcgtgtg--cgcgcgcacgcatgtatgtgcatatcgctgatatat 297
|||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||
Sbjct: 441 gtaaaacgtgtgtgtgcgtgtgtacgcgcgcac--atgtatgtgcatatctctgatatat 498
Query: 298 atatacacacatacataca--tacatacatcatactggacactattaacttccagtatca 355
||||| | | ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 499 atatatatatatacatacacatacatacatcatactggacactattaacttccagtatca 558
Query: 356 tagtataatatatagatacttatacatattgataacaatatcctagatcaagtttctcaa 415
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 559 tagtataatatatagatacttatacatattgataacaatatcctagatcaaggttctcaa 618
Query: 416 cctgtggattacaactcctatggggggccaaatgatcctttcactggagtcacatgaaac 475
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 619 cctgtggattacaactcctatggggggccaaatgaacctttcactggagtcacatgaaac 678
Query: 476 cattataaaacagatgtgtatattatgattcacaacagttgcaaggttacagttatgaaa 535
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 679 cattataaaacagatgtgtatattacgatttacaacagttgcaaggttacagttatgaaa 738
Query: 536 tagcaacaaaaataattttttggatgcaggtcagcccaacatgagcaactgtattg 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tagcaacaaaaataattttttggatgcaggtcagcccaacatgagcaactgtattg 794
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 993
Length adjustment: 10
Effective length of query: 582
Effective length of database: 983
Effective search space: 572106
Effective search space used: 572106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
