Query= MSMg01no480_o13.b1 MSMg01no480_o13.b1 CHROMAT_FILE:
MSMg01no480_o13.b1 PHD_FILE: MSMg01no480_o13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:22 2005
(636 letters)
>mm_chr16_74090325_74091360
Length = 1036
Score = 810 bits (419), Expect = 0.0
Identities = 434/439 (98%), Gaps = 1/439 (0%)
Strand = Plus / Minus
Query: 199 atggtagcatattacatatccggcatactggacatttccagtatg-ttcttaacagtaga 257
||||||||||||||||||||||||||||||||||||||||||| | ||| ||||| ||||
Sbjct: 1036 atggtagcatattacatatccggcatactggacatttccagtaggattcataacaataga 977
Query: 258 aattagatatttatcttaggatccataagagtatggaaactacagttacgaagtagcaac 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976 aattagatatttatcttaggatccataagagtatggaaactacagttacgaagtagcaac 917
Query: 318 aaaaaaattttggttttggtcgtcaccaccaaatgaggaactgtattcaagacttgcagc 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 aaaaaaattttggttttggtcgtcaccaccaaatgaggaactgtattcaagacttgcagc 857
Query: 378 attaaaagagctgagaaccagggctctataaagtgattttattattatactggagaagca 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 attaaaagagctgagaaccagggctctataaagtgattttattattatactggagaagca 797
Query: 438 tgaaggctttgattcaacttgtctaggaagtgattctcaggcaaacacatcctgtggcat 497
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 796 tgaaggctttgattcaacttgtctaggaagtgattctcaggcaaacacaccctgtggcat 737
Query: 498 tcctcaggatgggcttcagaaacctaggatccgggttggctataaatgcatttacccagc 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tcctcaggatgggcttcagaaacctaggatccgggttggctataaatgcatttacccagc 677
Query: 558 aaaccagcttgccagacctaccaaactcatacttgctgaaagtatgtcttggaaaatagg 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 aaaccagcttgccagacctaccaaactcatacttgctgaaagtatgtcttggaaaatagg 617
Query: 618 tgactcattctaactttca 636
|||||||||||||||||||
Sbjct: 616 tgactcattctaactttca 598
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_o13.g1 MSMg01no480_o13.g1 CHROMAT_FILE:
MSMg01no480_o13.g1 PHD_FILE: MSMg01no480_o13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:22 2005
(317 letters)
>mm_chr16_73919655_73920371
Length = 717
Score = 605 bits (313), Expect = e-178
Identities = 316/317 (99%)
Strand = Plus / Plus
Query: 1 atatatctgatgattgtgaaaactgacaaaggtcttctgttccacaacaaaggacatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atatatctgatgattgtgaaaactgacaaaggtcttctgttccacaacaaaggacatgtt 260
Query: 61 tgtgcctgcctggagtgctgttcctggtctggttatcttctcagctatatgcttaggtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgcctgcctggagtgctgttcctggtctggttatcttctcagctatatgcttaggtgt 320
Query: 121 atttcaaaaataagtagctcataaacactgaagatgatggctatttccctattagaaata 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttcaaaaataagtagctcacaaacactgaagatgatggctatttccctattagaaata 380
Query: 181 tttcagtcagtagagctacctaaaagtgcaaagtctttcatctgacttcaggtatgatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttcagtcagtagagctacctaaaagtgcaaagtctttcatctgacttcaggtatgatgt 440
Query: 241 aaatcagcggaagatactttcttgtaggtcatagatactgaaatgtaaatcagtctttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatcagcggaagatactttcttgtaggtcatagatactgaaatgtaaatcagtctttca 500
Query: 301 gaaaaaccaaattccct 317
|||||||||||||||||
Sbjct: 501 gaaaaaccaaattccct 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
