Query= MSMg01no482_l09.b1 MSMg01no482_l09.b1 CHROMAT_FILE:
MSMg01no482_l09.b1 PHD_FILE: MSMg01no482_l09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:41 2005
(631 letters)
>mm_chr16_35312156_35313188
Length = 1033
Score = 1158 bits (599), Expect = 0.0
Identities = 624/633 (98%), Gaps = 2/633 (0%)
Strand = Plus / Minus
Query: 1 agcttgattctatttgcaaaaatgtacaagtctcctggtttggagccatcatgaacgatt 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 833 agcttgattctatttgcaaaaatgtacaagtctactggtttggagccatcatgaatgatt 774
Query: 61 tgcctttgtttttaaagaaaagattccaaacaaggactgcataggattctggtaactt-- 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 tgcctttgtttttaaagaaaagattccaaacaaggactgcataggattctggtaacttta 714
Query: 119 tatcatccctcaaaacaatgggccttggtatgtagtcccttcaggggctgtgattacttg 178
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 713 tatcatccctcaaaacaatgggccttggtatgtagtcccttcaggggctgtaattacttg 654
Query: 179 ataggaggagtcactgaactgcctcatctctctaacccattgtgtggacacttgcaaaag 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ataggaggagtcactgaactgcctcatctctctaacccattgtgtggacacttgcaaaag 594
Query: 239 tggaagatttttggaaccttcactgcccctccatcttagaaaaataaggtagaaggtagg 298
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tggaagatacctggaaccttcactgcccctccatcttagaaaaataaggtagaaggtagg 534
Query: 299 cagtaagtgggtttatgatgtccatggtttatttaaaacaaactccaagtctgtctagat 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 cagtaagtgggtttatgatgtccatggtttatttaaaacaaactccaagtctgtctagat 474
Query: 359 ttctgtggtaacaaagctgctaacgaagttgtcacgtaccttctgagagcagccccgagc 418
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 473 ttctgtggtaacaaagctgctaacaaagttgtcacgtaccttctgagagcagccccgagc 414
Query: 419 gaggcaccacatggactgtgtttggcattgtatacctattgagccttgtaagtaaagtgg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gaggcaccacatggactgtgtttggcattgtatacctattgagccttgtaagtaaagtgg 354
Query: 479 ttcaacttaggaaggctttctgagctagtgggtagagcagaagagattcctcatgatagt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ttcaacttaggaaggctttctgagctagtgggtagagcagaagagattcctcatgatagt 294
Query: 539 taatcaaccaggaaatgtgggctttctgattaattgtggctttactacatctccgtattt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 taatcaaccaggaaatgtgggctttctgattaattgtggctttactacatctccgtattt 234
Query: 599 gatagctctcttactggtttgattcaaaagcta 631
|||||||||||||||||||||||||||||||||
Sbjct: 233 gatagctctcttactggtttgattcaaaagcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1033
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1023
Effective search space: 635283
Effective search space used: 635283
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_l09.g1 MSMg01no482_l09.g1 CHROMAT_FILE:
MSMg01no482_l09.g1 PHD_FILE: MSMg01no482_l09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:41 2005
(129 letters)
>mm_chr16_35142883_35143411
Length = 529
Score = 246 bits (127), Expect = 5e-70
Identities = 127/127 (100%)
Strand = Plus / Plus
Query: 1 tcatggccacagaataaaagaacgccagaaatcaaagccttaccacatagtggaaaaacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatggccacagaataaaagaacgccagaaatcaaagccttaccacatagtggaaaaacg 260
Query: 61 taggcagggacatcaagcagctgcggaatagatgatctggggtgggggtggaaggaatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taggcagggacatcaagcagctgcggaatagatgatctggggtgggggtggaaggaatgg 320
Query: 121 gtgaggg 127
|||||||
Sbjct: 321 gtgaggg 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 129
Length of database: 529
Length adjustment: 8
Effective length of query: 121
Effective length of database: 521
Effective search space: 63041
Effective search space used: 63041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
