Query= MSMg01no482_m06.b1 MSMg01no482_m06.b1 CHROMAT_FILE:
MSMg01no482_m06.b1 PHD_FILE: MSMg01no482_m06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:44 2005
(472 letters)
>mm_chr16_9884099_9884970
Length = 872
Score = 598 bits (309), Expect = e-175
Identities = 324/329 (98%), Gaps = 1/329 (0%)
Strand = Plus / Minus
Query: 1 acgaagagggaatggaagccggagcttgctgtcatagatgcctcctgggagccaaaagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 acgaagagggaatggaagccggagcttgctgtcatagatgcctcctgggagccaaaagct 269
Query: 61 ggtgatgtgcttgaagtaaaattgacaggaatggctatggaagacagggaattgctagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ggtgatgtgcttgaagtaaaattgacaggaatggctatggaagacagggaattgctagaa 209
Query: 121 tctcagcccagtgctttccattttcatgtatgtatgagtcattcagtgggattgtgatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 208 tctcagcccagtgctttccattttcatgtatgtatgagtcattcagtgggattttgatgt 149
Query: 181 agatgtttggaagccatgcctgaatcttctgatcggttaagtctggttgctaggggggct 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 148 agatgtttggaagccatgcctgaatcttctgatcagttaagtctggttgctaggggg-ct 90
Query: 241 aagaacctgcgcttctagacatttctagaaacatctgttgatgctgcttccagttgtgat 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 89 aagaacctgcgcttctagacatttctggaaacatctgttgatgctgcttccagttgtgat 30
Query: 301 gttggggccacttggattcaaaggctggg 329
|| ||||||||||||||||||||||||||
Sbjct: 29 gtaggggccacttggattcaaaggctggg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_m06.g1 MSMg01no482_m06.g1 CHROMAT_FILE:
MSMg01no482_m06.g1 PHD_FILE: MSMg01no482_m06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:45 2005
(246 letters)
>mm_chr16_9721529_9722174
Length = 646
Score = 447 bits (231), Expect = e-130
Identities = 240/243 (98%)
Strand = Plus / Plus
Query: 1 ggcagcttgtgaggggagagaacaaacttagagacaggtaatttggagtccatttctgtc 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 ggcagcttgtgaggggagagaacaaacttagagacaggtaagctggagtccatttctgtc 260
Query: 61 acttgctccaaaagtactctgggttatatttgttatcctcctgcctggagattgggtgca 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 acttgctccaaaagtactctgggttatagttgttatcctcctgcctggagattgggtgca 320
Query: 121 cagaaccgctcccagatgcccttcctaccatactgtacaatggtgtttgtcccactgcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagaaccgctcccagatgcccttcctaccatactgtacaatggtgtttgtcccactgcca 380
Query: 181 gctgagtgttctgcatctccagtgaaatcatgtgcagccttcctcagaaggctgatgtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctgagtgttctgcatctccagtgaaatcatgtgcagccttcctcagaaggctgatgtga 440
Query: 241 ggg 243
|||
Sbjct: 441 ggg 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
