Query= MSMg01no483_b19.b1 MSMg01no483_b19.b1 CHROMAT_FILE:
MSMg01no483_b19.b1 PHD_FILE: MSMg01no483_b19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:11 2005
(608 letters)
>mm_chr16_17052143_17053150
Length = 1008
Score = 1131 bits (585), Expect = 0.0
Identities = 600/605 (99%), Gaps = 2/605 (0%)
Strand = Plus / Minus
Query: 5 gaattcactcaggtcc-ttgcttggtggtaagtacctttactcactgagccatctaatga 63
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 gaattcactcagg-ccattgcttggtggtaagtacctttactcactgagccatctaatga 690
Query: 64 gtccatctgtcgatacacaggcctttcttgtgtagccctggctgtcctagaactcacaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gtccatctgtcgatacacaggcctttcttgtgtagccctggctgtcctagaactcacaga 630
Query: 124 aatctgcctatcactagttcccagagtgctagaaataaaataaaggcatgtgcaacatcg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 aatctgcctatcactagttcccagagtgctagaaataaaataaaggcatgtgcaacatcg 570
Query: 184 cccaggttcttgttaactcagttttgttgcgcaccctttgttatgctccagccggtttcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 569 cccaggttcttgttaactcagttttgttgcgcaccctttgttatgctccagcctgtttcc 510
Query: 244 tagtgttaattcttatcttgtattgctttaacttttccttgaggtgggatgaccaccacc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tagtgttaattcttatcttgtattgctttaacttttccttgaggtgggatgaccaccacc 450
Query: 304 agcacagcttccttgacttaaatgttttagtattgtcttttgttagtattgtcttttgtt 363
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 449 agcacagcttccttgacttaaatgttttagtattgtcttttgttagtattatcttttgtt 390
Query: 364 cggcggtgagctgtgattggcagccgggttgagctcaagctcagaactccagagaccagg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 389 cggcggtgagctgtgattggcagccgggttgagctcaagctcagaactccagagacccgg 330
Query: 424 catatgactgttgcctgcaagggactgtaggtgtttggccataccccctgggccccgggc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 catatgactgttgcctgcaagggactgtaggtgtttggccataccccctgggccccgggc 270
Query: 484 tcctgttgcagctacagcctcccacagtcccctgcagaggtgtggccactagtcatgtag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tcctgttgcagctacagcctcccacagtcccctgcagaggtgtggccactagtcatgtag 210
Query: 544 ggcaacaccccaagctcctggtattctgtctggactccaccccagctacctttacctata 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ggcaacaccccaagctcctggtattctgtctggactccaccccagctacctttacctata 150
Query: 604 gccag 608
|||||
Sbjct: 149 gccag 145
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_b19.g1 MSMg01no483_b19.g1 CHROMAT_FILE:
MSMg01no483_b19.g1 PHD_FILE: MSMg01no483_b19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:11 2005
(499 letters)
>mm_chr16_16974299_16975197
Length = 899
Score = 944 bits (488), Expect = 0.0
Identities = 494/496 (99%)
Strand = Plus / Plus
Query: 1 aaaaaacacatccaagaggatacagaaaaaataaatggcattaggatagttactgtgtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaaaacacatccaagaggatacagaaaaaataaatggcattaggatagttactgtgtaa 260
Query: 61 aagaggaattaggaaacatgaaacattacaaaatcacaggaattaaatcacattttcaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagaggaattaggaaacatgaaacattacaaaatcacaggaattaaatcacattttcaat 320
Query: 121 aataactctaaatattaataatttcaattcctcaatcaaaactactgggtggtgggtcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aataactctaaatattaataatttcaattcctcaatcaaaactactgggtggtgggtcat 380
Query: 181 gtgtaatggctctttgatctttcttgaataccaggtggagtttatatgagttgtaggtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtaatggctctttgatctttcttgaataccaggtggagtttatatgagttgtaggtta 440
Query: 241 ataatactttaaagtatattagttcaagagggtattaaaggtcttagcttgtccaagcat 300
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 ataatactttaaagtatattagttcaagagggtattaaaggtcttagctcatccaagcat 500
Query: 301 ggcaaacatgttgacaggttttagcatttaccctttttcctgtagagacaattttaattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggcaaacatgttgacaggttttagcatttaccctttttcctgtagagacaattttaattc 560
Query: 361 agcaacataactatctggcagggtatcacatccaaagaccttctaggttgatatgatcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agcaacataactatctggcagggtatcacatccaaagaccttctaggttgatatgatcat 620
Query: 421 gagtcagagatcagatatgcccaactcatacaataacagcacaaaagaggctactttaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagtcagagatcagatatgcccaactcatacaataacagcacaaaagaggctactttaga 680
Query: 481 ggagagagagagagaa 496
||||||||||||||||
Sbjct: 681 ggagagagagagagaa 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
