NCCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCCAACATATTACTCAGGAGCCCTGAGGGAACCTCTGGAGACTCC
AGCAGCAAATTGGGAATGCTGACACTGAATCTTCTAAACTGAAAAACTAC
TTGATTCTTGGACTTCCTGCTGGACTGTATCACTGACTGAATCTCTGAAT
ACATACATATATATGTATATGTATATGTATATGTATATGTATATGTATAT
GTATATGTATATGTATATGTATATGTATATGNANANGNNNANGNNNNNNN
NCNNNNNCNNNNNCNCNNNTTTTTTTTTTTTTNTNTTTTNNATATAGTAT
TTTAATAAATGGTTTCATTTTATTAGGTTAGTTCCTGTTTAGAACCCTGA
CTTCTTTTGTCTTTCCCCCCCCCCATGGTTAACGAGCGATTACCACTTTA
AAGAAAAACCGTGAAAGAATCCGCCCCATCTACTCCTTAGTTGTGACAGC
TATGTCTTCCGTACCCCCTTCCGTTTCGGTGTCTCCACCCGCGACTCCTT
CCCTCATTCCTGTATACAACCCCTTACACATTTATGATTATAATGTTTTC
CCTTCGTACACATTCCTCCTCCCCCCCCCTCACTATGTGATTTCCACGCG
CCTTCTACAATACCTCTTTTTCTTTTTTATTTTTTACCACCAACTCTTCT
TTTACTCCTCCTCTCCCCCTCTTCTTCCCACACTTCTTCCATCCTTTTTA
TCCCTTTTTTTTACCTCTCCCTTCCTTTT

NCCGATGATAGTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAAACCAGCTTGTGCTTGTCAGAAAG
GAGAAGAAAAGATGGTCAGGAAGGGAGAACCCTGGGACTTGCTTCCTGGC
CTGAGACGTGGGAGGGGTCTGACAACATGACACATGAGTTATGAAAAGGG
TGAATTACTGGGAACAAGTGTACAACAGGGATATCAGGGAGATAGACAGG
AAGAGCAGGAGAAGTTGCCCTTGTACTGAACCTATGTAAATGTCTTCCTT
GTCACAATTACCCCCCAAATATATATGTATACATATAATATATATAATAT
GATATGTAAGTATATATATAAATATATATTGGTACCCATATATATGTATA
TATGATGTCTATATAAATAAAAAATATATAGTCAATTAAACAGTCATTTC
TGTAAGGCCACTGAACATATTGTGATCATGTTCATTAGAATATGTGCCAT
TTGATTATAGCTTCTTCAATCATGTGGTTCATTCTTAGAAATATGCTTGA
AAGAGTATTGGGATGGGATAGGGTAGGCAATGGTTCTCAACCTTTCTAAC
GCTGCAAACATTTAAAACAGTTCCTCAAGTTGTGGTGACCCCCAACCTAT
AATTATCTCATTGCTACTTCATTACTGTAATTTTGCTGCTGTTATGAATC
ATAATGGTAATTCCTGATATGCAAGGTATCTGATATGTTGCCCCTAANGG
GTCACACCCACTGGTTGTACACTGGG

Query= MSMg01no483_b21.g1 MSMg01no483_b21.g1 CHROMAT_FILE:
MSMg01no483_b21.g1 PHD_FILE: MSMg01no483_b21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:12 2005
         (631 letters)



>mm_chr16_16009463_16010493
          Length = 1031

 Score = 1191 bits (616), Expect = 0.0
 Identities = 616/616 (100%)
 Strand = Plus / Minus

                                                                        
Query: 16   tgtcagaaaggagaagaaaagatggtcaggaagggagaaccctgggacttgcttcctggc 75
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 tgtcagaaaggagaagaaaagatggtcaggaagggagaaccctgggacttgcttcctggc 972

                                                                        
Query: 76   ctgagacgtgggaggggtctgacaacatgacacatgagttatgaaaagggtgaattactg 135
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971  ctgagacgtgggaggggtctgacaacatgacacatgagttatgaaaagggtgaattactg 912

                                                                        
Query: 136  ggaacaagtgtacaacagggatatcagggagatagacaggaagagcaggagaagttgccc 195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911  ggaacaagtgtacaacagggatatcagggagatagacaggaagagcaggagaagttgccc 852

                                                                        
Query: 196  ttgtactgaacctatgtaaatgtcttccttgtcacaattaccccccaaatatatatgtat 255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851  ttgtactgaacctatgtaaatgtcttccttgtcacaattaccccccaaatatatatgtat 792

                                                                        
Query: 256  acatataatatatataatatgatatgtaagtatatatataaatatatattggtacccata 315
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791  acatataatatatataatatgatatgtaagtatatatataaatatatattggtacccata 732

                                                                        
Query: 316  tatatgtatatatgatgtctatataaataaaaaatatatagtcaattaaacagtcatttc 375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731  tatatgtatatatgatgtctatataaataaaaaatatatagtcaattaaacagtcatttc 672

                                                                        
Query: 376  tgtaaggccactgaacatattgtgatcatgttcattagaatatgtgccatttgattatag 435
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671  tgtaaggccactgaacatattgtgatcatgttcattagaatatgtgccatttgattatag 612

                                                                        
Query: 436  cttcttcaatcatgtggttcattcttagaaatatgcttgaaagagtattgggatgggata 495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611  cttcttcaatcatgtggttcattcttagaaatatgcttgaaagagtattgggatgggata 552

                                                                        
Query: 496  gggtaggcaatggttctcaacctttctaacgctgcaaacatttaaaacagttcctcaagt 555
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551  gggtaggcaatggttctcaacctttctaacgctgcaaacatttaaaacagttcctcaagt 492

                                                                        
Query: 556  tgtggtgacccccaacctataattatctcattgctacttcattactgtaattttgctgct 615
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491  tgtggtgacccccaacctataattatctcattgctacttcattactgtaattttgctgct 432

                            
Query: 616  gttatgaatcataatg 631
            ||||||||||||||||
Sbjct: 431  gttatgaatcataatg 416


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space:   634041
Effective search space used:   634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)