Query= MSMg01no483_n23.b1 MSMg01no483_n23.b1 CHROMAT_FILE:
MSMg01no483_n23.b1 PHD_FILE: MSMg01no483_n23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:14 2005
(580 letters)
>mm_chr16_42906140_42907119
Length = 980
Score = 1075 bits (556), Expect = 0.0
Identities = 573/580 (98%), Gaps = 4/580 (0%)
Strand = Plus / Plus
Query: 5 gaattcctttgtcaaaatctactctttaaaaatttttaaatgtatacaatttatatagtc 64
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattcctttggaaaaatctactctttaaaaatttttaaatgtatacaatttatatagtc 260
Query: 65 aaactgtataaacaacattaaggaagatgggcatctacacagatacaatactcagatata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaactgtataaacaacattaaggaagatgggcatctacacagatacaatactcagatata 320
Query: 125 tagataaatagatagatagatag--a--tagtttggtttatcaggagttgttttgaaaaa 180
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 321 tagataaatagatagatagatagttagttagtttggtttatcaggagttgttttgaaaaa 380
Query: 181 aaaaagagacttccaaccagttctattttctgatgttcatcatcccaaagctgaaaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaagagacttccaaccagttctattttctgatgttcatcatcccaaagctgaaaatat 440
Query: 241 atcaccactttagaaaaggcacctgggagttagcaaaggctatgaggagcatgtggtggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcaccactttagaaaaggcacctgggagttagcaaaggctatgaggagcatgtggtggg 500
Query: 301 accagtaatataaccagcactattttcctggagctagtgcatgtgaaaatttggttaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accagtaatataaccagcactattttcctggagctagtgcatgtgaaaatttggttaaag 560
Query: 361 gtatagtataaagagtttcatttttttctttcaaggaaggtttatttaaaagcaccagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtatagtataaagagtttcatttttttctttcaaggaaggtttatttaaaagcaccagtt 620
Query: 421 ttagtttttacttctaataaaagatgaaaggttatttactgtagtttcagatccatattg 480
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 621 ttagtttttacttctaataaaagatgaaaggttatttactgtagtttccgatccatattg 680
Query: 481 tatagaactttgtcttgcttgaatggtaactcctaataggtttatttctctggtatacta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tatagaactttgtcttgcttgaatggtaactcctaataggtttatttctctggtatacta 740
Query: 541 tgtattaaatgcattgcacctgttaatacagactgcattg 580
||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtattaaatgcattgcacctgttaatacagactgcattg 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_n23.g1 MSMg01no483_n23.g1 CHROMAT_FILE:
MSMg01no483_n23.g1 PHD_FILE: MSMg01no483_n23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:14 2005
(559 letters)
>mm_chr16_43072358_43073316
Length = 959
Score = 1073 bits (555), Expect = 0.0
Identities = 558/559 (99%)
Strand = Plus / Minus
Query: 1 ctgcatgttgcccagaaacaacaacactgcatggctgaaattttaaaccagtgcaaacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 ctgcatgttgcccagaaacaacaacactgcatggctgaaattttaaaccagtgcaaacac 700
Query: 61 tcccaccctgtccaggttcatctggtgactgagacagtgcagaagagagtaggtatgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 tcccaccctgtccaggttcatctggtgactgagacagtgcagaagagagtaggtatgcag 640
Query: 121 ccatcctgacctaaagcaacctttacaaacaaacaacttaaagcacatcaaagaagtttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 ccatcctgacctaaagcaacctttacaaacaaacaacttaaagcacatcaaagaagtttg 580
Query: 181 ataataaaacaaagctgccaaagacagtgcttctccactggcctgacctcggatgccagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ataataaaacaaagctgccaaagacagtgcttctccactggcctgacctcggatgccagt 520
Query: 241 tgctttaccagcacagtcctataaagtactctcgaattcaccagatgaatgctttgtaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tgctttaccagcacagtcctataaagtactctcgaattcaccagatgaatgctttgtaat 460
Query: 301 taaaattattctgcctcatcaaatcttagaaatgtgtgtctgattcttacagtgatatgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 taaaattattctgcctcatcaaatcttagaaatgtgtgtctgattcttacagtgatatgc 400
Query: 361 aatgcaatgtgttacaaagtacagttctttggaactgtcaatatttataagacaaatgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 aatgcaatgtgttacaaagtacagttctttggaactgtcaatatttataagacaaatgat 340
Query: 421 caaaaattaacaactgcatattatgacatccataagcagttttaatgaacaagacgtagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 caaaaattaacaactgcatattatgacatccataagcagttttaatgaacaagacgtagt 280
Query: 481 aactcaacagttaatacatatacttgcatagctataagaaattcacatacatacctgtgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aactcaacagttaatacatatacttgcatagctataagaaattcacatacatacctgtgc 220
Query: 541 agctatgaggtacaaagag 559
|||||||||| ||||||||
Sbjct: 219 agctatgaggcacaaagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
