Query= MSMg01no486_a01.b1 MSMg01no486_a01.b1 CHROMAT_FILE:
MSMg01no486_a01.b1 PHD_FILE: MSMg01no486_a01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:10 2005
(687 letters)
>mm_chr16_77243142_77244228
Length = 1087
Score = 727 bits (376), Expect = 0.0
Identities = 385/388 (99%)
Strand = Plus / Minus
Query: 5 gaattcagtggtcattccatagcagtagatggagttcttcgcatcaggacctcttatttt 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gaattcagtggtcactccatagcagtagatggagttcttcgcatcaggacctcttatttt 329
Query: 65 tattgtgtacacatgagcattcacacatgtcttaattacttcaccagtcacgcactttct 124
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 328 tattgtgtacacatgagcattcacacatgtcttaattacttcaccagtcatgcactttct 269
Query: 125 ccgtaaactgagaaagccatgaaataatgtgctgtccttctagcccacaaagaagtaatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ccgtaaactgagaaagccatgaaataatgtgctgtccttctagcccacaaagaagtaatg 209
Query: 185 tttatgttgcaggactttccctgtccaattacattagtgcataagaggcctgtgactaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 tttatgttgcaggactttccctgtccaattacattagtgcataagaggcctgtgactaga 149
Query: 245 cagggaaaatggagggagctaagagtggcagagagaaagagagagagacagagacagaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 cagggaaaatggagggagctaagagtggcagagagaaagagagagagacagagacagaga 89
Query: 305 ccaagacagagatagagacagacagtgaaagagggagtatcaagggagaggaaagaggag 364
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 88 ccaagacagagatagagacagacagagaaagagggagtatcaagggagaggaaagaggag 29
Query: 365 aatgtagccaatgtgatgatttcataag 392
||||||||||||||||||||||||||||
Sbjct: 28 aatgtagccaatgtgatgatttcataag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space: 729129
Effective search space used: 729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no486_a01.g1 MSMg01no486_a01.g1 CHROMAT_FILE:
MSMg01no486_a01.g1 PHD_FILE: MSMg01no486_a01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:10 2005
(688 letters)
>mm_chr16_77046693_77047779
Length = 1087
Score = 1218 bits (630), Expect = 0.0
Identities = 674/690 (97%), Gaps = 5/690 (0%)
Strand = Plus / Plus
Query: 1 tattcataatcttctttacaagtgaatatagaagacaggtttgtttgttttgtgagggaa 60
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 201 tattcataatcttctttacaagtgaatatggaagacaggtttgtttgttttctgagggaa 260
Query: 61 acacaatagaagtatgggggggatggaatccatgcactaattgatcctgttcctagagct 120
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacaatagaagtat-gggggaatggaatccatgcactaattgatcctgttcctagagct 319
Query: 121 tggctttctccgttcctatttcaaatttatttcctctctgtcactctccgggttctagcc 180
||||||||| | |||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 320 tggctttctactttcctatttcaaatttatttcctccccatcactctccgggttctagcc 379
Query: 181 attttaattactgcgatggctcttgttttgtgatgcatttcataccacctacaacctttc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 380 attttaattactgcgatggctcttgttttgtgatgcatttcataccacctacaaccttcc 439
Query: 241 ccccaaccccatccctttgtctccattattgagtctggactgggaagcttgaccttctta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ccccaaccccatccctttgtctccattattgagtctggactgggaagcttgaccttctta 499
Query: 301 tagctctg--ctgccttatagctccatcttctttatagcgccattctccacatagctcct 358
|||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 500 tagctctggcct--cttatagctccatcttctttatagcaccattctccacatagctcct 557
Query: 359 ctttacagccacagcctccttagctgtgtcctgaggaccatgtgctcagtcacatgaaac 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ctttacagccacagcctccttagctgtgtcctgaggaccatgtgctcagtcacatgaaac 617
Query: 419 catgtacttgatggcatgtgagaggtcccatcattccaggtactgtaccccgggactctg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 catgtacttgatggcatgtgagaggtcccatcattccaggtactgtaccccgggactctg 677
Query: 479 tactgtatgcttcacctatcttcccagctgtgattaaatacggtgtagcacaacttactg 538
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 678 tactgtatgcttcacctatcttcccagctgtgattaaatacggtgtagcagaacttactg 737
Query: 539 tcttttatgaggtttcattgtatatgaggtcatttaaagaaccctttctacagcaactat 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tcttttatgaggtttcattgtatatgaggtcatttaaagaaccctttctacagcaactat 797
Query: 599 gtctaatattttaaaagttcttgtgtgctcctcttggagaaaaagtggtaggtaacaata 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gtctaatattttaaaagttcttgtgtgctcctcttggagaaaaagtggtaggtaacaata 857
Query: 659 aaaagagatttttgtaattgttaaaatgca 688
||||||||||||||||||||||||||||||
Sbjct: 858 aaaagagatttttgtaattgttaaaatgca 887
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1087
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1077
Effective search space: 730206
Effective search space used: 730206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
