Query= MSMg01no487_o13.b1 MSMg01no487_o13.b1 CHROMAT_FILE:
MSMg01no487_o13.b1 PHD_FILE: MSMg01no487_o13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:39 2005
(691 letters)
>mm_chr16_62083150_62084240
Length = 1091
Score = 1081 bits (559), Expect = 0.0
Identities = 562/563 (99%)
Strand = Plus / Minus
Query: 129 cattaaaaataacttagcatgtcacagctatgaataaaggcatatatacagtcttactaa 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1091 cattaaaaataacttagcatgtcacagctatgaataaaggcatatatacagtcttactaa 1032
Query: 189 attatacaatgcatgtatgtgtacatgcaactagcaaccttccaagtattttgtatagaa 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 attatacaatgcatgtatgtgtacatgcaactagcaaccttccaagtattttgtatagaa 972
Query: 249 gtatgttggtatttcttacctgtaattctgttataattaaaaatttcatattataaatgt 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 gtatgttggtatttcttacctgtaattctgttataattaaaaatttcatattataaatgt 912
Query: 309 tcttaaaagtttttaaaattcagaaaatggaagtaaaacaataaatattatgcaagaatg 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 tcttaaaagtttttaaaattcagaaaatggaagtaaaacaataaatattatgcaagaatg 852
Query: 369 cataaaaagagaaagaaaatctatttatgcaaacgtcctggtgtaaaatgttaagcgctt 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 cataaaaagagaaagaaaatctatttatgcaaacgtcctggtgtaaaatgttaagcgctt 792
Query: 429 tcctagagttcatttctcatttgtttcttcatccttgtaaaagtataaaccaatgtgctt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 tcctagagttcatttctcatttgtttcttcatccttgtaaaagtataaaccaatgtgctt 732
Query: 489 gtaaaaatcactagttaggagataatgtgtttaacaaatgctcaaacatctgtcttgata 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gtaaaaatcactagttaggagataatgtgtttaacaaatgctcaaacatctgtcttgata 672
Query: 549 actaactaatactatatgagcaattaatacccttcagagtaaggaaatcacttacgggag 608
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 671 actaactaatactatatgagcaattaatactcttcagagtaaggaaatcacttacgggag 612
Query: 609 taaaataaaagtttactgactttctgagggagaaactttatgaaaaatgagtgtcatggt 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 taaaataaaagtttactgactttctgagggagaaactttatgaaaaatgagtgtcatggt 552
Query: 669 ggatataaggtctactctccaaa 691
|||||||||||||||||||||||
Sbjct: 551 ggatataaggtctactctccaaa 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space: 736161
Effective search space used: 736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no487_o13.g1 MSMg01no487_o13.g1 CHROMAT_FILE:
MSMg01no487_o13.g1 PHD_FILE: MSMg01no487_o13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:39 2005
(669 letters)
>mm_chr16_62035051_62036118
Length = 1068
Score = 1116 bits (577), Expect = 0.0
Identities = 646/669 (96%), Gaps = 2/669 (0%)
Strand = Plus / Plus
Query: 1 atagtgccattttttttctacctccttccaacctgataatatgtttcatatttcactgtg 60
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagtgcca-tttttttctccctccttccaacctgataatatgtttcatatttcactgtg 259
Query: 61 ttgtatagctttttaacttatattgtattgcttctggcatctttatcaaattaggatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttgtatagctttttaacttatattgtattgcttctggcatctttatcaaattaggatttt 319
Query: 121 ttttccaaaatataaaaagttttacaagacatattctattgtcagctgttggtgtcagaa 180
||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||
Sbjct: 320 ttttccaaaatataaaaagttttacaaaacatattctatcgtcagctgttagtgtcagaa 379
Query: 181 cactagaagttatgagagaaataccttccccatttcatatgcacattggctttccttcaa 240
|||||||||||||||||||||||||||||| ||||||| || | ||||||||||||||||
Sbjct: 380 cactagaagttatgagagaaataccttccctatttcatctgtaaattggctttccttcaa 439
Query: 241 agaatctcacacaactgagaagtaagctattaaaaaacattgtacctattttccaataaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agaatctcacacaactgagaagtaagctattaaaaaacattgtacctattttccaataaa 499
Query: 301 caatgtgaaatgagattagaagctcccagcacagtaatggtgggtaattaagaagatggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 caatgtgaaatgagattagaagctcccagcacagtaatggtgggtaattaagaagatggg 559
Query: 361 agagcaattgtcctttgtgatctatctctatacatgaagaaatatatatttcatatgtaa 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 560 agagcaattgtcctttgtgatctatctctatacatgaagaaatgtatatttcatatgtaa 619
Query: 421 aaacacatcacacaccatgaatgtgcatgattaaataataataataataaagaaaacatt 480
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 620 aaacacatcacataccatgaatgtgcatgattaaaaaataataataataaagaaaacatt 679
Query: 481 gacaacacgtagaaccacgtcggaatgtagaaaactcaggaatcaagagccgtatgatct 540
||||||| |||| |||| ||| ||||||||||||||||||| ||||||| | ||||||||
Sbjct: 680 gacaacatgtagtaccatgtcagaatgtagaaaactcaggattcaagagacatatgatct 739
Query: 541 gatttttttcttttgttaaagtcttgcctatatatgtatttgtgaagcactaagctcctt 600
|||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 740 gatttttt-cagttgttaaagtgttgcctatatatgtatttgtgaagcactaagctcctt 798
Query: 601 ttcttccttccaattaaatcttgaatttaatcttgaattttcactgaaaaaattgtcaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ttcttccttccaattaaatcttgaatttaatcttgaattttcactgaaaaaattgtcaag 858
Query: 661 ctactctcc 669
|||||||||
Sbjct: 859 ctactctcc 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1068
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1058
Effective search space: 697222
Effective search space used: 697222
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
