Query= MSMg01no488_e18.b1 MSMg01no488_e18.b1 CHROMAT_FILE:
MSMg01no488_e18.b1 PHD_FILE: MSMg01no488_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:10 2005
(654 letters)
>mm_chr16_51933865_51934919
Length = 1055
Score = 1236 bits (639), Expect = 0.0
Identities = 648/651 (99%), Gaps = 1/651 (0%)
Strand = Plus / Plus
Query: 5 gaattcaatatattccatagaaacctagtggattccaggatgcccagcaatgttcaaaaa 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatatattttatagaaacctagtggattccaggatgcccagcaatgttcaaaaa 264
Query: 65 ttaatgatgtttttttgaggctcaagggagttcaatgcagcagtaatctatacacatatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttaatgatgtttttttgaggctcaagggagttcaatgcagcagtaatctatacacatatg 324
Query: 125 aaatctgataaaagattcaagcaaataaggaatcaaggtcttagtgattcctctccatgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaatctgataaaagattcaagcaaataaggaatcaaggtcttagtgattcctctccatgg 384
Query: 185 ggtcatggtcacttcctgaacatgttt-caggatattgcatcatacttgagccctgcagt 243
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 385 ggtcatggtcacttcctgaacatgttttcaggatattgcatcatacttgagccctgcagt 444
Query: 244 tagaaatatcttggccgaacagtcatctgtcatgtgcaacctgaatcagttcagttctgc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tagaaatatcttggccgaacagtcatctgtcatgtgcaacctgaatcagttcagttctgc 504
Query: 304 tgtcgactcattattttactcagtagtcgaccctttcttctaatttgatattgagggagt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtcgactcattattttactcagtagtcgaccctttcttctaatttgatattgagggagt 564
Query: 364 ataggaaacactttcctcaaacatggcaccttaatgtactgaatattttattgtgacaaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ataggaaacactttcctcaaacatggcaccttaatgtactgaatattttattgtgacaaa 624
Query: 424 aataaagatgtagaggctggggaaacggttcagtggataaagtgctagatgcttaaacat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aataaagatgtagaggctggggaaacggttcagtggataaagtgctagatgcttaaacat 684
Query: 484 gaggatctgaattcatatccctagcctacctggaagaatagggtgttgtgggccttatta 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gaggatctgaattcatatccctagcctacctggaagaatagggtgttgtgggccttatta 744
Query: 544 ataacaccacctctggaaggcagggacagatgaatgttgaaaacttgttgactagccaag 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ataacaccacctctggaaggcagggacagatgaatgttgaaaacttgttgactagccaag 804
Query: 604 gtagccaatacagaaagttctggattcaaagagatatcctgtctcaaagaa 654
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gtagccaatacagaaagttctggattcaaagagatatcctgtctcaaagaa 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1055
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1045
Effective search space: 672980
Effective search space used: 672980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_e18.g1 MSMg01no488_e18.g1 CHROMAT_FILE:
MSMg01no488_e18.g1 PHD_FILE: MSMg01no488_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:10 2005
(687 letters)
>mm_chr16_52114417_52115503
Length = 1087
Score = 1193 bits (617), Expect = 0.0
Identities = 673/697 (96%), Gaps = 11/697 (1%)
Strand = Plus / Minus
Query: 1 tttaagatgagaatcaagtaagtctgaagaatttggggcagaagaaagagaaagaactca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1059 tttaagatgagaatcaagtaagtctgaagaatttggggcagaagaaagagaaagaactca 1000
Query: 61 accagtgggaaggtagactagtcagcactgttcacgaagtcaaaaagcacaaggacgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 999 accagtgggaaggtagactagtcagcactgttcacgaagtcaaaaagcacagggacgaca 940
Query: 121 gaaaaaccaacagtgaagagcgcttctccaaacatctcccaaa---------cattttag 171
||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 939 gaaaaaccaacagtgaagagcgcttctccaaacatctcccaaaggtgttgctcattttag 880
Query: 172 aactctagttatacatttctgtatacgttctggcagtagcctggaactgaatgttcatcc 231
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 879 aactctagttatacatttctgtatacattctggcagtagcctggaactgaatgttcatcc 820
Query: 232 taaaagtaacaaaacgttaaaggcaatttacagccttcctcagtctgtacactcagcagg 291
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 819 taaaagtaacaaaacgttaaaggcaatttacagccttcctcagtctgtagactcagcaag 760
Query: 292 cggtgggagggctgaggaggtagggagagtacttggcctgcaggttaagtgacttcctga 351
||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||
Sbjct: 759 cggtgggagggctgaggaggtagggggagtacttgacctgtaggttaagtgacttcctga 700
Query: 352 cataacagttctacacaataacaggcccttgttgtctgtagctaagcagagaaaacccaa 411
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 cataacagttctatacaataacaggcccttgttgtctgtagctaagcagagaaaacccaa 640
Query: 412 agtgtctaaaattcataattcactgtgctgtgatatttaacaaagtaaatataattctaa 471
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 agtgtcaaaaattcataattcactgtgctgtgatatttaacaaagtaaatataattctaa 580
Query: 472 aaacaattgagcaaagctgtcgtttcttaagaacccgctaacaaagcactttatcacaaa 531
||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 579 aaacaattgagcaaagctgtcgtttcttaagaacctgctaacaaagcactttataacaaa 520
Query: 532 acgtagttttcagttttcaaaatgaatttctgtgaacaa-ctggttctatacattttcag 590
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 519 acgtagttttcagttttcaaaatgaatttctgtgaacaacct-gttctatacattttcag 461
Query: 591 agagaaacgtgattttgaaagtcaccatggatgctctgggttctcagtgttaatacagga 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 agagaaacgtgattttgaaagtcaccatggatgctctgggttctcagtgttaatacagga 401
Query: 651 ggctggcagtcttctggaatctggctctctgctttgc 687
|||||||||||||| |||||||| |||||||||||||
Sbjct: 400 ggctggcagtcttccggaatctgcctctctgctttgc 364
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space: 729129
Effective search space used: 729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
