NCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCATTGTTTTTCATAGAAGAGTAGTAAAACATTGTGTAATTGTAC
AACTTTTTCTGAATCCATTCCTCTTTTGAGGGAAATCTGGCTTACTTCAA
CCTTCTTATTATTAAGGCTTCTATGAACATAGTGGAGCATGTGTCCTTAT
TACATGTTGGAGCATCTTCTAGCTGTATGTTCAGGAGTGGTATATCTGTT
TCCTCCAGTAGATCTAAGTCCAATTTTCTAAGGGAACTGCCAACTGATCT
GCAGAGTTATTGTTCCACCTTGCAATCTCACCAGCAATGGAGGAGTGTTC
TTCTGTACATCCTCGCCAGCATCTGCTGAGTTTTTGATCTTAGCCATTCT
GACTGGTGTGAGGTTGAATCTCAGGGTCCTGTATGCATTTCCCTGATGAC
TAAGGATGTTGAACACTTGTTTTTAGGTGCTTCCATTTGGTATTTCTCAA
TTAAGAATTCTTTATTTAGCTCTGTACCCCAATTTTATAGGTTTCTCCCC
CCCTCCTCTGGAGTATAACTTCTTAAGTTCTTTATATATATTTGATATTA
GCCCTCTATCAGATGTGGAGTTTGTAAAGGTCTTTTCCTAATCTGTTGGG
TGCCATTTTGTCTTATTGGCAGTGTCCTTTGCCTTACAGAAGCTTTGCAN
TTTTATAAGGTCCCTTTGCCAATTCTTGATCTTAGAACATAAGCTAATGG
TATTCTGTTCAGGAAATTTTCCCCTGTGCCCATGTTCTTG

NCGATGATGTGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCAGGTATCTTTTCTGTCTCAGGTTGCT
GAGATTGTATACATGAACCATAATGGCTAACTCTATTCTACCTTTTACCT
TCCTGTTTAAAATGTATTAAGAGTTGAACTAACACAAGTCATAAGGAATA
GTCCTGTAAGTGGTGTTTTTCTGTTTGTTTTGCTTTGGTAAAAGTGCTCA
TATTTGAACAGTGATACAGTAAAGGTCACACTACCTTTAAAATAAAATGA
TGACCAAGCATATATAAATTTTATTAAAAAACAAATCAATTTTAGAATAA
CCAGGCTAAAGTGATAAAATAAATATAATTTAATATCTGAAATTCAACTT
TAGCAGAAATTTCAGACTGTATTGGATAATTTTGTCTAGGACATCAAGGT
GCCGGAATGAGAGCCTCAGCAGTGTAGTGAGGAGCAGGATTCAGTGAAGG
GTGAGTAAGATGCCTAAATTCATCAAGTTTGCCTTGGGATAGTCTACTGT
TGAAATCCTACAACATAGACATTTTTTAGGTCTGACATTGGCTTATGATT
ATATTTCTAAATGGACATAATACCAATTACCTATTTAGCCTCAATTTTAT
CTCCAATATTTAATATGTTCATAATACTACTTGTGTTCTGAAACAACTCA
TTCCTACCAAGATAAATCANGAGAGACTTTCTTTAATTACATTCTAAATT
TCTAGGGATCTAATCTATTTGA

Query= MSMg01no489_f20.g1 MSMg01no489_f20.g1 CHROMAT_FILE:
MSMg01no489_f20.g1 PHD_FILE: MSMg01no489_f20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:34 2005
         (580 letters)



>mm_chr16_53613481_53614460
          Length = 980

 Score = 1091 bits (564), Expect = 0.0
 Identities = 576/580 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   caggtatcttttctgtctcaggttgctgagattgtatacatgaaccataatggctaactc 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggtatcctttctgtctcaggttgctgagattgtatacatgaaccataatggctaactc 260

                                                                       
Query: 61  tattctaccttttaccttcctgtttaaaatgtattaagagttgaactaacacaagtcata 120
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 tattctaccttttaccttcctgtttaaaatgtataaagagttgaactaacacaagtcata 320

                                                                       
Query: 121 aggaatagtcctgtaagtggtgtttttctgtttgttttgctttggtaaaagtgctcatat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggaatagtcctgtaagtggtgtttttctgtttgttttgctttggtaaaagtgctcatat 380

                                                                       
Query: 181 ttgaacagtgatacagtaaaggtcacactacctttaaaataaaatgatgaccaagcatat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgaacagtgatacagtaaaggtcacactacctttaaaataaaatgatgaccaagcatat 440

                                                                       
Query: 241 ataaattttattaaaaaacaaatcaattttagaataaccaggctaaagtgataaaataaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataaattttattaaaaaacaaatcaattttagaataaccaggctaaagtgataaaataaa 500

                                                                       
Query: 301 tataatttaatatctgaaattcaactttagcagaaatttcagactgtattggataatttt 360
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tataatttattatctgaaattcaactttagcagaaatttcagactgtattggataatttt 560

                                                                       
Query: 361 gtctaggacatcaaggtgccggaatgagagcctcagcagtgtagtgaggagcaggattca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtctaggacatcaaggtgccggaatgagagcctcagcagtgtagtgaggagcaggattca 620

                                                                       
Query: 421 gtgaagggtgagtaagatgcctaaattcatcaagtttgccttgggatagtctactgttga 480
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 621 gtgaagggtgagtaagatgcctaaatttatcaagtttgccttgggatagtctactgttga 680

                                                                       
Query: 481 aatcctacaacatagacattttttaggtctgacattggcttatgattatatttctaaatg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatcctacaacatagacattttttaggtctgacattggcttatgattatatttctaaatg 740

                                                   
Query: 541 gacataataccaattacctatttagcctcaattttatctc 580
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gacataataccaattacctatttagcctcaattttatctc 780


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space:   552900
Effective search space used:   552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)