NAACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATGCG
CGGAATTCGGGTTTATTCATAATTTCTTTATTCATGATGCCTTTTGTTCT
GCCCTTCTGGGATCAGTGATCGTGGCTAAACCAGTGGCCATAAATGAGAA
ATTCCTGTAGTTTGGCACAAAAAGCAGTGATAGAAACACAGTCTGCCTCT
TGACAACACCATATGCCTTGCAGATGTTTTAACCTGCTGCAGGTGAGTCT
GGAAATGGCTGCAGGATCAACAGATTTGACAGTGACTGCACTGCAAGGTT
TGAAACACACTCTTTTAGCTAAAGTGCTTCCAGAGCCCTCAGCCACAAAC
AATGTAAGAAACAGGACAATTTTAAGGAGCTCTTCATTACATAATGTGCT
ACACAGTGTCAAATAGCTAGTGAAAAATGATATTCCATATAACATAGTTG
GAATACTAGCTGAAATAAATACAGAAACCAAGCAGAAGACTGAGACAACA
AGAACTATCAATAATTCAGCAATATAACAATGGTGAAATATATGTACTAA
AACTGAATAGTCTCTCTGTCAAGACAGTCAAGGTAGAAAAATCTCTGGAG
AATGAATCCATTGNNCAGCTTANNNGAATAGGTACATTTTACCCAAAACA
ATAAAGTAAAACTTTGCAAATCAAAAACTTATTTAGGATTACCCTAAACT
TCTTTAAAAGGGAAGGAGTGAACCTTTAGTCTGACCAAATTTAT

NCCCCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCCACTGTACAATTCACACACCA
CATTAAGCTCAAGAAGATGGAAGTCCAAAATGTGGATGCTTCTGTCCTAC
TTAGACAAGGGAAGAAAATAATCATGAGAGGCAGAGGGTAGGAGGGACTT
GGAGGAAGAGATGAGGGGGAGAGGAAAATGAGGACAGGATCAGGCAAGGG
AGTGAGATAAAGGAGATATACAGAGGGTTAAGATGTTGAATAGAGTTGTG
TACCAATGGGGGTAAGGGAATTTGTTGTTTGCAACAAGAAGGNAAGATGC
CAAGAAAGCAAGAGGTTTCAAGGAACCAATGGGGATGACATTAGCTGAAA
TACCCATCAAAGGAGAGAGAACCCCCCCACATATCTTAATCTAGGCAGGC
CTGGGTTGAAGGATGGGGCCACCCACCCCTTTCGAAAATATTAACCCTTT
AAAACTTGTCAAAGTAAATACCGGTACAAAGAATGGAATAGAGACTGATA
AAAGGGGCTCCCGAAACTGCCCCGCCTGGGGATCCTTTTCTTTTACGGGC
CTTCTATTTCGAAACTATTCCTTGATGTCTTTACGTGGTTTTTGACCCTT
TTTTTTTTTTTTTTTTCTCCCGGATTTGTCCGGCCTAAACTTACCCAATT
TAAATGGTGGAGTAATTTTCTCCCCACTCTTGGGCCATTTGT

Query= MSMg01no489_j18.b1 MSMg01no489_j18.b1 CHROMAT_FILE:
MSMg01no489_j18.b1 PHD_FILE: MSMg01no489_j18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:54 2005
         (497 letters)



>mm_chr16_80913480_80914377
          Length = 898

 Score =  934 bits (483), Expect = 0.0
 Identities = 492/497 (98%), Gaps = 5/497 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattcgggtttattca---taatttctttattcatgatgccttttgttctgcccttctg 60
           ||||||||||||||  |   ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcgggtttat--aaaataatttctttattcatgatgccttttgttctgcccttctg 261

                                                                       
Query: 61  ggatcagtgatcgtggctaaaccagtggccataaatgagaaattcctgtagtttggcaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggatcagtgatcgtggctaaaccagtggccataaatgagaaattcctgtagtttggcaca 321

                                                                       
Query: 121 aaaagcagtgatagaaacacagtctgcctcttgacaacaccatatgccttgcagatgttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aaaagcagtgatagaaacacagtctgcctcttgacaacaccatatgccttgcagatgttt 381

                                                                       
Query: 181 taacctgctgcaggtgagtctggaaatggctgcaggatcaacagatttgacagtgactgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 taacctgctgcaggtgagtctggaaatggctgcaggatcaacagatttgacagtgactgc 441

                                                                       
Query: 241 actgcaaggtttgaaacacactcttttagctaaagtgcttccagagccctcagccacaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 actgcaaggtttgaaacacactcttttagctaaagtgcttccagagccctcagccacaaa 501

                                                                       
Query: 301 caatgtaagaaacaggacaattttaaggagctcttcattacataatgtgctacacagtgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 caatgtaagaaacaggacaattttaaggagctcttcattacataatgtgctacacagtgt 561

                                                                       
Query: 361 caaatagctagtgaaaaatgatattccatataacatagttggaatactagctgaaataaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 caaatagctagtgaaaaatgatattccatataacatagttggaatactagctgaaataaa 621

                                                                       
Query: 421 tacagaaaccaagcagaagactgagacaacaagaactatcaataattcagcaatataaca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tacagaaaccaagcagaagactgagacaacaagaactatcaataattcagcaatataaca 681

                            
Query: 481 atggtgaaatatatgta 497
           |||||||||||||||||
Sbjct: 682 atggtgaaatatatgta 698


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 898
Length adjustment: 10
Effective length of query: 487
Effective length of database: 888
Effective search space:   432456
Effective search space used:   432456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)