Query= MSMg01no489_l13.b1 MSMg01no489_l13.b1 CHROMAT_FILE:
MSMg01no489_l13.b1 PHD_FILE: MSMg01no489_l13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:04 2005
(607 letters)
>mm_chr16_30814456_30815462
Length = 1007
Score = 456 bits (236), Expect = e-132
Identities = 278/312 (89%), Gaps = 31/312 (9%)
Strand = Plus / Minus
Query: 327 ccaataatcctcccccaggaaatggtaataggggttcttcaaggaaaataaaa------- 379
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 ccaataatcctcccccaggaaatggtaataggggttcttcaaggaaaataaaaattgata 948
Query: 380 ------------------------agaaggaagagcaagtgaagaagaaataaatgaagg 415
||||||||||||||||||||||||||||||||||||
Sbjct: 947 taggtcagaaactcccgtctgcacagaaggaagagcaagtgaagaagaaataaatgaagg 888
Query: 416 tgaagcaggtgacactcttcttattcttagttggtataaaaatagccatttgtttaaggt 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 tgaagcaggtgacactcttcttattcttagttggtataaaaatagccatttgtttaaggt 828
Query: 476 ggaattggtaatcatgcattggctgatcatagcatgtgagaaatcacagcagtggcacca 535
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 827 ggaattggtaatcatgcattggctgatcatagaatgtgagaaatcacagcagcggcacca 768
Query: 536 ggctgagaagaacacgtgcaatcgtcacttcctacagccacaataaggcactgtggctga 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 ggctgagaagaacacgtgcaatcgtcacttcctacagccacaataaggcactgtggctga 708
Query: 596 ggccgtttacag 607
||| ||||||||
Sbjct: 707 ggctgtttacag 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no489_l13.g1 MSMg01no489_l13.g1 CHROMAT_FILE:
MSMg01no489_l13.g1 PHD_FILE: MSMg01no489_l13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:04 2005
(424 letters)
>mm_chr16_30628037_30628865
Length = 829
Score = 779 bits (403), Expect = 0.0
Identities = 421/429 (98%), Gaps = 5/429 (1%)
Strand = Plus / Plus
Query: 1 agcgctttcctgcagttcttgcatcacccgcattaatagatacagggttaaactggggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcgctttcctgcagttcttgcatcacccgcattaatagatacagggttaaactggggaa 260
Query: 61 accaaaagcttttcggtcaaggttgtgcaccacacaccctgccaaccctcattagaagta 120
|||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||
Sbjct: 261 accaaaagcttttcggtcaaggttgtgcaccagatatcctgccaaccctcattagaagta 320
Query: 121 aaaaaaaaaaaa-gttgattgtttgttaaataaattttgttatttctaagcagagattgg 179
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaaaaaaaaaagttgattgtttgttaaataaattttgttatttctaagcagagattgg 380
Query: 180 tggccagaaacatgaaataaaagcacagactgcccacttcttccccaaacccaaagtctg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggccagaaacatgaaataaaagcacagactgcccacttcttccccaaacccaaagtctg 440
Query: 240 acttcaaaacaaacaaacaaac----ccccaaacaactccatcttaaacctttctgaaag 295
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 acttcaaaacaaacaaacaaacaaacccccaaacaactccatcttaaacctttctgaaag 500
Query: 296 gccaatctaattagctacatattttccttccagctaagggtagatggctttctaccatcc 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccaatctaattagctacatattttccttccagctaagggtagatggctttctaccatcc 560
Query: 356 cacagaaggattttaagtctagatctacaggtcacctagataccggtctccacgccctgc 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacagaaggattttaagtctagatctacaggtcacctagataccggtctccacgccctgc 620
Query: 416 attccagca 424
|||||||||
Sbjct: 621 attccagca 629
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 829
Length adjustment: 9
Effective length of query: 415
Effective length of database: 820
Effective search space: 340300
Effective search space used: 340300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
