Query= MSMg01no490_e19.b1 MSMg01no490_e19.b1 CHROMAT_FILE:
MSMg01no490_e19.b1 PHD_FILE: MSMg01no490_e19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:51 2005
(659 letters)
>mm_chr16_17889603_17890661
Length = 1059
Score = 864 bits (447), Expect = 0.0
Identities = 459/463 (99%)
Strand = Plus / Minus
Query: 1 gtgtattgggcatccccagaaagatggcagaggccatccatgtgcacatgcgcagcaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gtgtattgggcatccccagaaagatggcagaggccatccatgtgcacatgcgcagcaggg 404
Query: 61 gagccctcatacgatctaaatgggacctacagtggaagaggctccagtggagggagtaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gagccctcatacgatctaaatgggacctacagtggaagaggctccagtggagggagtaat 344
Query: 121 gggaccttgaatccatggctttctaggctggagcttggcatcagtcccacagttctgtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gggaccttgaatccatggctttctaggctggagcttggcatcagtcccacagttctgtct 284
Query: 181 taagttgtcctgcagaaccctaagcaccctaatgtcccttgatgatgtgggcagcaaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 taagttgtcctgcagaaccctaagcaccctaatgtcccttgatgatgtgggcagcaaaga 224
Query: 241 cagggattgctgggttagattttttttttattagatattttcgttgtatacatttcaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 cagggattgctgggttagattttttttttattagatattttcgttgtatacatttcaaat 164
Query: 301 gctatcccgaaagttccctataccctcccccctccgccctgctcccctacccacccactc 360
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 gctatcctgaaagttccttataccctcccccctccgccctgctcccctacccacccactc 104
Query: 361 cctcttcttggccctgccattcccctgtactggggcatataaagtttgcagtaccaaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 cctcttcttggccctgccattcccctgtactggggcatataaagtttgcagtaccaaggg 44
Query: 421 gcctctcttcccagtgatggccggctaggccatcttctgctac 463
||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 43 gcctctcttcccagtgatggctgactaggccatcttctgctac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_e19.g1 MSMg01no490_e19.g1 CHROMAT_FILE:
MSMg01no490_e19.g1 PHD_FILE: MSMg01no490_e19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:51 2005
(406 letters)
>mm_chr16_17752429_17753233
Length = 805
Score = 756 bits (391), Expect = 0.0
Identities = 400/403 (99%), Gaps = 1/403 (0%)
Strand = Plus / Plus
Query: 1 tttgttcagctctgagccccattttttaatggggttatttgattttctggagtccacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgttcagctctgagccccattttttaatggggttatttgattttctggagtccacctt 260
Query: 61 cttgggttctttatatatattggatattagtcccctatctgatttgggataggtaaagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgggttctttatatatattggatattagtcccctatctgatttgggataggtaaagat 320
Query: 121 cctttcccaatctgttggtggtctttttgtcttattgacggtgttcttttgccttgcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctttcccaatctgttggtggtctttttgtcttattgacggtgttcttttgccttgcaga 380
Query: 181 agctttgcaattttatgaggtcccatttattgattctaggagagttattaatgaagattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agctttgcaattttatgaggtcccatttattgattctaggagagttattaatgaagattt 440
Query: 241 tcctgacaaagtgagttgtctgttcttacagggaggatggaggtccccgacagcaggctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcctgacaaagtgagttgtctgttcttacagggaggatggaggtccccgacagcaggctt 500
Query: 301 tgttaataagtagtatatacctggttagtaagtagtatactaggcgcctgtggtctcagg 360
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 501 tgttaataagtagtatatacctggttagtaagtagtgtactagccgcctgtggtctcagg 560
Query: 361 ttgtctgggattcctggtgaagggggttggnggatggggtggg 403
|||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 ttgtctgggattcctggtgaagggggttgg-ggatggggtggg 602
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 805
Length adjustment: 9
Effective length of query: 397
Effective length of database: 796
Effective search space: 316012
Effective search space used: 316012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
