XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTC
CCATATCCTTTAGGACTGTCCTGAAGGTCCCAGTGTTTATCATTTTGTTG
AGGCATTAGCCACATTTTCTCCTTCTGTACTTGTGTTGTCTCAGATTATC
ACGGAGTCATTAATGTTAACAGGGAGTACATTCCTTAGAAGAATGTGAAA
ATAAGTACATTATTATATAAACATTATTATAAACAAGCCTTATGCTCATA
TCAGAAATTGACACTAGTGGAGCCTCACATCAGAGCCCTGCCCCAAGGGG
AGGAACCGTGTACCTCTGTCCCCACCAACAGGGCCACACTGGGATCGGCA
TAATAATAATAATAAATAGTACGTTATTGTTGTTACTATTAAATGTATAA
TATATAATATGAAATCTAATTCTAATAAATTCAGTCATAATACACATTCT
ATACATACGGTTCATTCCAAGAACCCTAATATATATGAATGTGCAAAAAC
TTAATAGAGAAGTGAATGTAAACTGACATTTTAGGTTTCTGCGTTCAGTT
TCCTAAGGCATTACTCTAGGGACAGTAATAATGCAAGCCACAGTAGATAT
TTCCCTCTGACTCTTGTGTGATTGCTTCCATTTTCCACATAAATCAATCT
CTCTTTTCTCTCCATCATGAGGCTTACCTGTTACTTCATTCTGGTGTAAA
ATGTTGAAGGTGTCAAGTAAAATGTCATGCGCAATATCGATGTTTGT

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCCAAAAAAGCTAAAATTAAGGTAATACATGAGCC
AGCTATATCACTCCTTGTTATATGGCTGAAAGAAAATACAATACTCTAAG
GGTACTTTTCATCCATGTTCATTGCTTCTATATTCTTAATAGGTAGAGAA
TAGGAACAAACTAAAATCTCAGCAATCATTGAATGGATAATGAAAATGTG
GTGTATATATGCTAAGGAGTATTATTCAATTGTAAAGAAAAAATCAAAAT
AATCCAATTTTGGGTTAATTGGTTGGAAATAGAAAACAACATATTATGTG
AGGTAAACCAACCCCAAGAAAATTAATGTCACATGTTCTCTGTTTTTGGA
TGTCCCTAGGTCAAAACATTCAGATATTAGAAAATATACTTGGTTAACAG
CACAAACCTGGGGAGTAAGTATGGATTCTTTCCAGAGTGGGGAATGTAGA
AGCAATGGGGAAGGAAAGAGCAGAATGCAAGAGGCCTGACCAGGAAAATA
GAAAGAGGAAGCTCTAATGAATGAAAGAGGAGGAGATAAACACAGACATA
GGGTAAAAATGACAATAAGCCATAGCGCGTAGTTTCTACTATCCCACTTT
AAGATCCAGGCAGATGGCTTTATCAGTCCCTGCCCAGGTTCCCTCTGGTT
AGCTTATTTTAATATGATTTAGCTCAATTGACAGGCTCTGCGAAGTCTCT
CTCACCTAGAATGACCTTCTCTTCN

Query= MSMg01no491_g19.b1 MSMg01no491_g19.b1 CHROMAT_FILE:
MSMg01no491_g19.b1 PHD_FILE: MSMg01no491_g19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:20 2005
         (662 letters)



>mm_chr16_80503794_80504858
          Length = 1065

 Score = 1170 bits (605), Expect = 0.0
 Identities = 646/661 (97%), Gaps = 3/661 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttcccatatcctttaggactgtcctgaaggtcccagtgtttatcattttgttg 64
           ||||||||||||||| ||||||||||||||||||  |||| |||||||||||||||||||
Sbjct: 205 gaattctttcccatagcctttaggactgtcctgactgtcctagtgtttatcattttgttg 264

                                                                       
Query: 65  aggcattagccacattttctccttctgtacttgtgttgtctcagattatcacggagtcat 124
           ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 265 aggcattagtcacattttctccttctgtactcgtgttgtctcagattatcacggagtcat 324

                                                                       
Query: 125 taatgttaacagggagtacattccttagaagaatgtgaaaataagtacattattatataa 184
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taatgttaacagggaggacattccttagaagaatgtgaaaataagtacattattatataa 384

                                                                       
Query: 185 acattattataaacaagccttatgctcatatcagaaattgacactagtggagcctcacat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acattattataaacaagccttatgctcatatcagaaattgacactagtggagcctcacat 444

                                                                       
Query: 245 cagagccctgccccaaggggaggaaccgtgtacctctgtccccaccaacagggccacact 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cagagccctgccccaaggggaggaaccgtgtacctctgtccccaccaacagggccacact 504

                                                                       
Query: 305 gggatcggcataataataataataaatagtacgttattgttgttactattaaatgtataa 364
           ||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 505 gggatcgacataataataataataaataatatgttattgttgttactattaaatgtataa 564

                                                                       
Query: 365 tatataatatgaaatctaattctaataaattcagtcataatacacattctatacatacgg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tatataatatgaaatctaattctaataaattcagtcataatacacattctatacatacgg 624

                                                                       
Query: 425 ttcattccaagaaccctaatatatat---gaatgtgcaaaaacttaatagagaagtgaat 481
           ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||
Sbjct: 625 ttcattccaagaaccctaatatatataatgaatgtgcaaaaacttaatagagaagtgaat 684

                                                                       
Query: 482 gtaaactgacattttaggtttctgcgttcagtttcctaaggcattactctagggacagta 541
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 685 gtaaactgacattttaggtttctgcgttcagtttcctaaggcattagtctagggacagta 744

                                                                       
Query: 542 ataatgcaagccacagtagatatttccctctgactcttgtgtgattgcttccattttcca 601
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 745 ataatgcaagccacagtagatatttccctctgactcttgtgtgattgctaccattttcca 804

                                                                       
Query: 602 cataaatcaatctctcttttctctccatcatgaggcttacctgttacttcattctggtgt 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 cataaatcaatctctcttttctctccatcatgaggcttacctgttacttcattctggtgt 864

            
Query: 662 a 662
           |
Sbjct: 865 a 865


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1065
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1055
Effective search space:   687860
Effective search space used:   687860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)