Query= MSMg01no491_j13.b1 MSMg01no491_j13.b1 CHROMAT_FILE:
MSMg01no491_j13.b1 PHD_FILE: MSMg01no491_j13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:33 2005
(604 letters)
>mm_chr16_63666323_63667326
Length = 1004
Score = 1091 bits (564), Expect = 0.0
Identities = 594/604 (98%)
Strand = Plus / Plus
Query: 1 atgtaaagcaattttagccactagagatattgtgatcagactcactctgcaggatatact 60
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 201 atgtaaagcaattttaaccactagagatattgtgaacagactcactctgcaggatgtact 260
Query: 61 tgggatttaagcgagcggaagacaacacatttgcctatctaggcgtcataaacctgggag 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggatttaagcgagcagaagacaacacatttgcctatctaggcgtcataaacctgggag 320
Query: 121 cagcaggccagctccataaataactttccatcaagaaacttagggacatttatggaaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagcaggccagctccataaataactttccatcaagaaacttagggacatttatggaaggg 380
Query: 181 ctttaatttaacagcagtcttcctgctcatctgtgaactgcacttcattcctgtagtaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttaatttaacagcagtcttcctgctcatctgtgaactgcacttcattcctgtagtaca 440
Query: 241 gcatcctttctcactcagtcatatattgactatgtaaagattccgttttctgcatgtgca 300
|||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 gcatcccacctcactcagtcatatattgactatgtaaagattccgttttcttcatgtgca 500
Query: 301 tgtatttatacttcgaaacctgctccctggtccatgttagtttcaggggctgctattgtc 360
|||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 501 tgtatttatacttcgaaacctgctccctggtccatgctagtttcaggggctggtattgtc 560
Query: 361 ccttctgcttccctacagtttatttattttgctccatctttctatttcatttaaggttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccttctgcttccctacagtttatttattttgctccatctttctatttcatttaaggttcc 620
Query: 421 ttagactaggaacaagcaggaaacaagtataatattttgccgctgaaagaatagctaata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttagactaggaacaagcaggaaacaagtataatattttgccgctgaaagaatagctaata 680
Query: 481 taaaaaagtgctgcaccccctcatcttccataactgatgtcacaacgagatgtttcttag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taaaaaagtgctgcaccccctcatcttccataactgatgtcacaacgagatgtttcttag 740
Query: 541 tgcacagactgttctagttgtttagaactgtagcttctttactcagttgtgtgttttcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgcacagactgttctagttgtttagaactgtagcttctttactcagttgtgtgttttcca 800
Query: 601 atag 604
||||
Sbjct: 801 atag 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no491_j13.g1 MSMg01no491_j13.g1 CHROMAT_FILE:
MSMg01no491_j13.g1 PHD_FILE: MSMg01no491_j13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:33 2005
(673 letters)
>mm_chr16_63814752_63815825
Length = 1074
Score = 1234 bits (638), Expect = 0.0
Identities = 665/674 (98%), Gaps = 1/674 (0%)
Strand = Plus / Minus
Query: 1 gagacgctattcactatgtccctccttttacatcaacaacaaatgatgttagtattttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 gagacgctattcactatgtccctccttttacatcaacaacaaatgatgttagtattttac 815
Query: 61 agcactttagacctcttgcttaaaataaatatagtctccttaacagcatatatgtcttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 agcactttagacctcttgcttaaaataaatatagtctccttaacagcatatatgtcttac 755
Query: 121 cctgagcaattaaccttccagataattcagtctaatgatcagttaagaggtctgaatctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 cctgagcaattaaccttccagataattcagtctaatgatcagttaagaggtctgaatcaa 695
Query: 181 gtgctctgtttgaaagttttatttgaaaggagtgaaaaatacagggagccattgcaaata 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 694 gtgctctgtttgaaagttttatttgaaaggagtgaaaaatccagggagccattgcaaata 635
Query: 241 gaatttc-tatctgtatttgttcttgttcatttcttaacataaaaacttccatgcatgta 299
||| | || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 gaaaagcataactgtatttgttcttgttcatttcttaacataaaaacttccatgcatgta 575
Query: 300 atatgcattaaaggaagaaaataatcattttgttattaaactaaataatttattctgata 359
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 atatggattaaaggaagaaaataatcattttgttattaaactaaataatttattctgata 515
Query: 360 acaatatatcataaataattttacccatatctcaatgaaagtacatgcattatttattta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 acaatatatcataaataattttacccatatctcaatgaaagtacatgcattatttattta 455
Query: 420 ttgattgatatattaattcattttgtactgttgtggctggtatgcattcaagggtttcta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ttgattgatatattaattcattttgtactgttgtggctggtatgcattcaagggtttcta 395
Query: 480 atgtgctttgtgagcttaataagcaacatgtatccaatgtttatcagatactgtgaggat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 atgtgctttgtgagcttaataagcaacatgtatccaatgtttatcagatactgtgaggat 335
Query: 540 gtaaattttagtgtcatttttattgctctggctatgccatatcaagctatctaccaaaat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gtaaattttagtgtcatttttattgctctggctatgccatatcaagctatctaccaaaat 275
Query: 600 caatacctgactttaagaatcagaataattagtgtcatgcatcagaaatcccttgactac 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 caatacctgactttaagaatcagaataattagtgtcatgcatcagaaatcccttgactac 215
Query: 660 tggtttaatcagga 673
||||||||||||||
Sbjct: 214 tggtttaatcagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1074
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1064
Effective search space: 705432
Effective search space used: 705432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
