Query= MSMg01no491_k12.b1 MSMg01no491_k12.b1 CHROMAT_FILE:
MSMg01no491_k12.b1 PHD_FILE: MSMg01no491_k12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:38 2005
(419 letters)
>mm_chr16_25353352_25354170
Length = 819
Score = 756 bits (391), Expect = 0.0
Identities = 412/419 (98%)
Strand = Plus / Minus
Query: 1 gactgaacacaatcactcctgttttaaggatgtgaaaactgaaatggaacacttagtatg 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 619 gactgaacacaatcactcctgttttaaagatgtgaaaactgaaatggaacactcagtatg 560
Query: 61 ttacacatagcaggttcatacgtacaggggcttgaaacaaatattgaaacatccgatcaa 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ttacacacagcaggttcatacgtacaggggcttgaaacaaatattgaaacatccgatcaa 500
Query: 121 atcaaggcttagttttggttctctccctagtgacacctcccaaaacaaaggacacttagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 atcaaggcttagttttggttctctccctagtgacacctcccaaaacaaaggacacttagc 440
Query: 181 gtgggtgtgcaaatgtgttcaaacacctctctggtgtccctacttgctactgcaagagtt 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 439 gtgggtgtgcaaaagtgttcaaacacctctctggtgtccctacttgctactgcaagaatt 380
Query: 241 gtgctttctagcaaacttcccccaaacttcctcttgcactgggccttgccctggaagaga 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 379 gtgctttctagcaaacttcccccaaacttcctgttgcactgggccttgccctggaagaga 320
Query: 301 ccttgcaatctatctctgcaggcttcagtcactggagttcttctttacatgtaacattcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ccttgcaatctatctctgcaggcttcagtcactggagttcttctttacatgtaacattcc 260
Query: 361 accttccatgccaaaattttactctttcataacaaactatctctacacccttctctcca 419
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 accttccatgccaaaattctactctttcataacaaactatctctacacccttctctcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no491_k12.g1 MSMg01no491_k12.g1 CHROMAT_FILE:
MSMg01no491_k12.g1 PHD_FILE: MSMg01no491_k12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:38 2005
(638 letters)
>mm_chr16_25199657_25200691
Length = 1035
Score = 1156 bits (598), Expect = 0.0
Identities = 627/638 (98%), Gaps = 3/638 (0%)
Strand = Plus / Plus
Query: 1 cacaggctcaacttaaattcacttcaagagcgaaggagaattcaggggaggtaaacctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 cacaggctcaacttaaattcacttcaagagcgaaggagaattcaggggaggtaaatctcc 260
Query: 61 cagtaaagacttggtggctgtttggtattaagtgacatagtttgcttctgccaagtgcac 120
||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 cagtaaagacttgttggctgtttggttttaagtgacatagtttgcttctgccaagtgcac 320
Query: 121 catcatccatgagtgacagaaggaggcatgcaggtaaaaacatgaaggatgcataaaagc 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 catcatccatgagtgacagaaggaggcatgcaggtaaaaacataaaggatgcataaaagc 380
Query: 181 atgggaaggatgtgggcacatctggtctggagaaccatgctgtttggtttaggagacctg 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgggaaggaggtgggcacatctggtctggagaaccatgctgtttggtttaggagacctg 440
Query: 241 gtccttgcttggctttctcctttcctggctgtgtaattttagacagagcattaattagtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtccttgcttggctttctcctttcctggctgtgtaattttagacagagcattaattagtc 500
Query: 301 cctcttgttttgaggatgattaaccaagagaaaatgaaagtgtgcacacatgggctgggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctcttgttttgaggatgattaaccaagagaaaatgaaagtgtgcacacatgggctgggt 560
Query: 361 tcagtacagaagtacttggtttaagttttaaagtatgctttatctaggagacaggaagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcagtacagaagtacttggtttaagttttaaagtatgctttatctaggagacaggaagac 620
Query: 421 ctagaactatgtttggcatcttatcaggaggccagaaaactggtggtgaattctgtcatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctagaactatgtttggcatcttatcaggaggccagaaaactggtggtgaattctgtcatc 680
Query: 481 taactctttttttttttggcacttatttatttattatttagtttacactccaaattttat 540
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taactctttttttt---ggcacttatttatttattatttagtttacactccaaattttat 737
Query: 541 tcccccctccaccctctgactgttccacatcccatacctcctccccaccctcctgtctcc 600
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 738 tcccccctccaccctctgactgttccacatcctatgcctcctccccaccctcctgtctcc 797
Query: 601 atgaggatgtccccacacccatcccccaccaaaccaga 638
|||||||||||||||||||||||||||||| |||||||
Sbjct: 798 atgaggatgtccccacacccatcccccacccaaccaga 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1035
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1025
Effective search space: 643700
Effective search space used: 643700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
