CAAAACAACACTCCCACTCCACCCCTCACTACCCATAATTATAAAATATT
ATTCTCCAAGTTTTATTATCAATATCTTCCTATATCTCATTTTTTTATTT
TTACATTTAACATTTTTATTTACATCCCCCCCCCCACAACCCATTCATTC
TTTTTACTTATTATAATTAAAATTTTTTTTCCCCTCTTTTTTTTCCTACA
ACTAAACCCTCCCTCCTTTTTCCCACTCTCCCCCCCTTTTTTCTCCCCCT
CTCCCCAACTAATTCCTCCCCAATTTTCTATTTTCCTTTTCGCCTGTCCC
CCTAATCTACTATCTTCTTATTTATATAATTAAATTTATCACTAAACAAT
CCCCCATAACCCCTCCACATAATTATAAAAAAAAAAATAAACCCCAATAT
ACACTTTTATACCCTTCAATACTTACCCCCACTTCCTCCCCTCTCTTNNN
NNNNAAATTGAGTAATCNTCAGAAATCTAACTCATATTTTTCCCCCCTTA
CCCCATAAGAATATAAAATCCACCAATATCTCCACTAATTTTTATAATTA
AAATGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTTTTTTTTA
AAAAATAGGTACAGAATAGTGCTTNNATNNNAATTTNTATTAAAAAAGGG
CGGGGGCCCGTNGAAAATTNTTNTACCNNNNACTAAAAGCCTTGGNGTGC
CTTTGCTCAAACAGGCACAAAAAAAAAAAAAAACACCCCCCCCTTTTTTT
TTTTTGTTGTTTTTATATAAAATAAAACACAAAAAAAATTTTTTTTTTTC
TTTTATAAAAAAAAAAAAAAAAAAAAAACATTCTCTCCCCCCCGGCCCGC
G

ATGCTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTGGAGCTAAAAATGAACAGGAGCCCTCCT
TAAAGGTGAATTTCATGAATAGCTTAGCAATACCAACAAAACAACCAAAC
CAAACCCAAACAAAACAAAACAAAAATCATTCTTGGAGCTAAAATAAAAA
TTTTTTAAAGTTTTATTTTATAGTACAGTAATTTATGAAATAGGATAAAC
TCTAAGAGTTTATTAAAAATAAAATCCAAATTATACTCTATAGGAATTCT
ACCTTACTAAAAACACTTTTGTATATCCACTTTTATCATAATTTCAAAAT
AGTGATATAATGATTTCTCTATTCTTCTTTTCCTTTCTTTTCTTTTCTGT
CCTTTTCTTTTCCTTTCTTTTCCTTTCTTTTCTCTCCTTTCTGTCTTTTC
CACAAGAGCAGAATGATAGGCAAATAAATATATCTTCTGAGTTGAGAGAA
CTTTAATGGACACGAATAACATGTCTATAGTTAAAAACTCAGCTCATGTC
TTTCAGATGTGGGCTAATAATTTCTCTTCTTTATATTTAAGGAACAGGGT
TATTATAAAAGGTTTGCATGGTTAATTTCCTCCGCATACTTATGCAGTGA
AGTGAAATATTATGAAGATAATAAAATATTTTTGCTGTGAGAACTTCCTA
AATAATATGTGTGTAAGGTCATGGAAACATACTTTATGAAAGTCTACNAC
CTGA

Query= MSMg01no493_d03.g1 MSMg01no493_d03.g1 CHROMAT_FILE:
MSMg01no493_d03.g1 PHD_FILE: MSMg01no493_d03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:38 2005
         (630 letters)



>mm_chr16_66986322_66987354
          Length = 1033

 Score = 1154 bits (597), Expect = 0.0
 Identities = 623/633 (98%), Gaps = 3/633 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tggagctaaaaatgaacaggagccctccttaaaggtgaatttcatgaatagcttagcaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tggagctaaaaatgaacaggagccctccttaaaggtgaatttcatgaatagcttagcaat 587

                                                                       
Query: 61  accaacaaaacaaccaaaccaaacccaaacaaaacaaaacaaaaatcattcttggagcta 120
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 586 accaacaaaacaaccaaaccaaaccaaaacaaaacaaaacaaaaatcattcttggagcta 527

                                                                       
Query: 121 aaataaaaattttttaaagttttattttatagtacagtaatttatgaaataggataaact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 526 aaataaaaattttttaaagttttattttatagtacagtaatttatgaaataggatcaact 467

                                                                       
Query: 181 ctaagagtttattaaaaataaaatccaa---attatactctataggaattctaccttact 237
           ||||||||| |||||| |||||||||||   |||||||||||||||||||||||||||||
Sbjct: 466 ctaagagttcattaaagataaaatccaaattattatactctataggaattctaccttact 407

                                                                       
Query: 238 aaaaacacttttgtatatccacttttatcataatttcaaaatagtgatataatgatttct 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aaaaacacttttgtatatccacttttatcataatttcaaaatagtgatataatgatttct 347

                                                                       
Query: 298 ctattcttcttttcctttcttttcttttctgtccttttcttttcctttcttttcctttct 357
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 346 ctattcttcttttcctttcttttcttttctgttcttttcttttcctttcttttcctttct 287

                                                                       
Query: 358 tttctctcctttctgtcttttccacaagagcagaatgataggcaaataaatatatcttct 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tttctctcctttctgtcttttccacaagagcagaatgataggcaaataaatatatcttct 227

                                                                       
Query: 418 gagttgagagaactttaatggacacgaataacatgtctatagttaaaaactcagctcatg 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 226 gagttgagagaactttaatggacacgaataacatgtctatagttaaaaactcatctcatg 167

                                                                       
Query: 478 tctttcagatgtgggctaataatttctcttctttatatttaaggaacagggttattataa 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 tctttcagatgtgggctaataatttctcttctttatatttaaggaacagggttattataa 107

                                                                       
Query: 538 aaggtttgcatggttaatttcctccgcatacttatgcagtgaagtgaaatattatgaaga 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 aaggtttgcatggttaatttcctccgcatacttatgcagtgaagtgaaatattatgaaga 47

                                            
Query: 598 taataaaatatttttgctgtgagaacttcctaa 630
            ||||||||||||||||||||||||||||||||
Sbjct: 46  aaataaaatatttttgctgtgagaacttcctaa 14


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1033
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1023
Effective search space:   634260
Effective search space used:   634260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)