Query= MSMg01no493_e09.b1 MSMg01no493_e09.b1 CHROMAT_FILE:
MSMg01no493_e09.b1 PHD_FILE: MSMg01no493_e09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:44 2005
(522 letters)
>mm_chr16_28141154_28142076
Length = 923
Score = 942 bits (487), Expect = 0.0
Identities = 511/519 (98%), Gaps = 1/519 (0%)
Strand = Plus / Minus
Query: 5 gaattccagattattcacttggtatttatattttctgtttttatagcacactttccatgg 64
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 723 gaattccagattatccacttggtatttatgttttctgtttttatagcacactttccatgg 664
Query: 65 cccctttgttttcaggagtcaacttctaaaccacatggtttcttactgcatcctggaca- 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 cccctttgttttcaggagtcaacttctaaaccacatggtttcttactgcatcctggacat 604
Query: 124 tttgaatgtcccatggtcttatggatctctgtatcgtctttaaatataaaacagaaggtt 183
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 603 tttgaatgtcccatggtcttatggatctctgtatcatctttaaatataaaacagaaggtt 544
Query: 184 aatattttgatgccatgaatattcaactagatgggttcacacaggagtttcgaatgcctt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aatattttgatgccatgaatattcaactagatgggttcacacaggagtttcgaatgcctt 484
Query: 244 tcctataatgtggccactttaccagaatagttgtcaaagcagttacagtaatgcacatga 303
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 483 tcctataatgtggccactttaccagaatagttgtcaaggcagttacagtaatgcacatga 424
Query: 304 tccttgacttataatgaatgattacatttagaaactttcagctttatgattgtgtgaatg 363
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 423 tccttgacttataatgaatgattacgtttagaaactttcagctttatgattgtgtgaatg 364
Query: 364 catgcatatgcatgctgtatatcaaaaatttcacccttttcctgagccagtggtatgttc 423
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 363 catgcatatgcatgctgtatatcaaaaatttcacccttttcctgagccagtgatatgttc 304
Query: 424 ctgtcaaacacaaatgaccaatgctacttatgaattatgtttttaagtaatggcacttgg 483
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ctgtcaaacacaaataaccaatgctacttatgaattatgtttttaagtaatggcacttgg 244
Query: 484 tatgctaggtgtttaatgtgtatttttcaatttatgatg 522
|||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tatgctaggtgtttaatgtgtatttttcaatttatgatg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 923
Length adjustment: 10
Effective length of query: 512
Effective length of database: 913
Effective search space: 467456
Effective search space used: 467456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_e09.g1 MSMg01no493_e09.g1 CHROMAT_FILE:
MSMg01no493_e09.g1 PHD_FILE: MSMg01no493_e09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:44 2005
(580 letters)
>mm_chr16_27950592_27951571
Length = 980
Score = 1091 bits (564), Expect = 0.0
Identities = 576/580 (99%)
Strand = Plus / Plus
Query: 1 atttattgatacatttgcaaaagctgtgctgagagccttttgtttcagctctattggtaa 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 atttattgatacatttgcaaaagctgtgttgagagccttttgtttcagctctattggtaa 260
Query: 61 ctcaaagaaatgaaaaaattttaagagagaataagggtaggcaacctataaaatgagaac 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcaaagaaatgaaaagattttaagagagaataagggtaggcaacctataaaatgagaac 320
Query: 121 tcatagactctgtgaccagagaaacattgagtacaattctggttttcctatttaccattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatagactctgtgaccagagaaacattgagtacaattctggttttcctatttaccattt 380
Query: 181 gtattaggtctctcactttgatgatgttatgagagggaacaacagtaatctcagaatgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtattaggtctctcactttgatgatgttatgagagggaacaacagtaatctcagaatgtc 440
Query: 241 aggatttattatggtacttaatttagaatttccaacagatagcagaaggctgttaaatgt 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggatttattaaggtacttaatttagaatttccaacagatagcagaaggctgttaaatgt 500
Query: 301 aagatatttcttcatccgtttttttcctcaattgacttgaactacaaacagtgtatcagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagatatttcttcatccgtttttttcctcaattgacttgaactacaaacagtgtatcagt 560
Query: 361 gaagccaaagacaaagggaaatgcaggaaacaagataataactcccataatagacccatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaagccaaagacaaagggaaatgcaggaaacaagataataactcccataatagacccatt 620
Query: 421 tacaaggtgattggaaatcaaatgaatagatttttttatcttgacattgggttgtgaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tacaaggtgattggaaatcaaatgaatagatttttttatcttgacattgggttgtgaaag 680
Query: 481 agtctgtcctcattcagctattttcctgggcaaagttagccatgccatcttgcaacaggg 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtctgtcctcattcagctattttcctgggcaaagttagccatgccatcttgcaacagga 740
Query: 541 tagcttttctgattgtagatcaagaacaaacttggtgaaa 580
||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tagcttttctgattgtagatcaagaacaaacttggtgaaa 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
