Query= MSMg01no493_f21.b1 MSMg01no493_f21.b1 CHROMAT_FILE:
MSMg01no493_f21.b1 PHD_FILE: MSMg01no493_f21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:52 2005
(611 letters)
>mm_chr16_9797261_9798271
Length = 1011
Score = 1046 bits (541), Expect = 0.0
Identities = 589/605 (97%), Gaps = 2/605 (0%)
Strand = Plus / Plus
Query: 5 gaattctctagaat-tcgggaaactcgttcatcctggaattttcagagaaaagaagcctg 63
|||||||||||||| | |||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctagaatat-gggaaacttgtttatcctggaattttcagagaaaagaagcctg 263
Query: 64 gacagaaagaccccatgcagagatgggacaggtccaaaggccgaaggaggagctgaagta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gacagaaagaccccatgcagagatgggacaggtccaaaggccgaaggaggagctgaagta 323
Query: 124 gctcagagtaacctgaggtattaatggaatctgcagatacagagcaatccctgtatacag 183
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gctcggagtaacctgaggtattaatggaatctgcagatacagagcaatccctgtatacag 383
Query: 184 aaatagcgtgatagagggtaggcatcatatcaaaagctagcccaccctcagacaacaagc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaatagcgtgatagagggtaggcatcatatcaaaagctagcccaccctcagacaacaagc 443
Query: 244 aaatggagagccactgagtgtgttacaatccattacagcagcaacagaaaatgatttggc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaatggagagccactgagtgtgttacaatccattacagcagcaacagaaaatgatttggc 503
Query: 304 aagaaaaggagtaaagagggatgaaaaacagagagaactgaagggtgcagcacaagaaca 363
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 504 aagaaaaggagtaaagagggatggaaaacagagagaactgaagggtgcagcacaagaaca 563
Query: 364 acagaaattagaaccgcagaatctgaactcatccatcgccacactgagtgacgatgaagc 423
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 564 acagaaattagaaccgcagaatcagaactcatccatcgccacactgagtgacgatgaagc 623
Query: 424 gaaaggtggaggttctcaagatggattgtgtaaaaacgcaagaccacctaacagaaggca 483
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |
Sbjct: 624 gaaaggtggaggttctcaagatggattgtgtaaaaacgcaagaccacctagcagacggta 683
Query: 484 cagacagacaggcagcaaattaatcaaaaaggacacaccacacaccagccagcttgttca 543
||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 684 cagacagactggcagcaaattagtcaaaaaggatacaccacacaccagccagcttgttca 743
Query: 544 ggctggggcatcgctgtttgcatcgggcaagcagaatctacagtggagcactccataatg 603
|||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 744 ggctggggcaccgctgttcgcatcgggcaagcagaatcaacagtggagcactccataatg 803
Query: 604 aacag 608
|||||
Sbjct: 804 aacag 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_f21.g1 MSMg01no493_f21.g1 CHROMAT_FILE:
MSMg01no493_f21.g1 PHD_FILE: MSMg01no493_f21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:52 2005
(529 letters)
>mm_chr16_9939306_9940234
Length = 929
Score = 957 bits (495), Expect = 0.0
Identities = 521/531 (98%), Gaps = 4/531 (0%)
Strand = Plus / Minus
Query: 1 aagatgtgctgttgctgttagctgctg--caaggtgtgtgctggcgttccagggatggat 58
|||| |||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 702 aagacgtgctgttgctgttagctgctgctca--gtgtgtgctggcgttccagggatggat 645
Query: 59 ggtgagctgcccgctttgtgctcctggggaagtcttgagcatcctcacttctatggtcat 118
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ggtgagctgcctgctttgtgctcctggggaagtcttgagcatcctcacttctatggtcat 585
Query: 119 agcaatctacagcctgctgggccagctctaactgcgctggatattctggaagggtgctgt 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 584 agcaatctacagcctgctgggccagctctaactgcgctggatattctggaagggtgctat 525
Query: 179 ctctggaaggatctaagcagagttcatttgaaagtccaccttctttcttctgaatggctt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ctctggaaggatctaagcagagttcatttgaaagtccaccttctttcttctgaatggctt 465
Query: 239 ctgaggctgagaatctctaaacaggcctttgccaacaaaatatgagatctttccctagtg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ctgaggctgagaatctctaaacaggcctttgccaacaaaatatgagatctttccctagtg 405
Query: 299 ttaagaaggatgtgagctgatagacaaggccagacatttttggtgaccccctgggcattg 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 404 ttaagaaggatgtgagctgatagacaaggccagacatttttggtgaccccctgggcatcg 345
Query: 359 gaagtaggtggtctaatccagacagtagatgagcttcagttggtctgtgttatttctcag 418
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gaagtaggtgatctaatccagacagtagatgagcttcagttggtctgtgttatttctcag 285
Query: 419 tgttagagaataggaatgtgggaatctgagtatgtcagtcatatggtctctctgcccata 478
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 284 tgttagagaataggaatgtgggaatctgagtatgtcaatcatatggtctctctgcccata 225
Query: 479 gtccctgcttcttgaggcttcaccttttaaattaaatatatattttgttat 529
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gtccctgcttcttgaggcttcaccttttaaattaaatatatattttgttat 174
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
