Query= MSMg01no493_g06.b1 MSMg01no493_g06.b1 CHROMAT_FILE:
MSMg01no493_g06.b1 PHD_FILE: MSMg01no493_g06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:54 2005
(672 letters)
>mm_chr16_90126352_90127423
Length = 1072
Score = 1183 bits (612), Expect = 0.0
Identities = 650/666 (97%), Gaps = 6/666 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcacctttgacgccagttctcttaattttgctttgttggcggaaattaaatgt 63
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 ggaattctcacctctgaagccagttctcttaattttgctttgttggcggaaattaaatgt 844
Query: 64 agaggcttgagagatgactcagcaattgaaagcactggctgtttttcaagaggccccagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 agaggcttgagagatgactcagcaattgaaagcactggctgtttttcaagaggccccagg 784
Query: 124 tttaattcccagtatccacatggtagcttacaactgtctgtaactccagtctccagggat 183
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 783 tttaattcccagtatccacatggtggcttacaactgtctgtaactccagtctccagggat 724
Query: 184 ccagcacctcttctggcctctgagggcaccaagaacatacacggtgtgcagacacatatg 243
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 723 ccagcacctcttctggcctctgagggcaccaagaacatacatggtgtgcagacacgtatg 664
Query: 244 caaacaaaataccaatatacgtaaataatttaaatactgaagtacacacagggaagtttt 303
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 663 caaacaaaataccaatatacataaataatttaaatactgaagtacacacagggaagtttt 604
Query: 304 gctctcatccctgtgaaccccttccttgtacctttgatttcctgcgaatccttggtttac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gctctcatccctgtgaaccccttccttgtacctttgatttcctgcgaatccttggtttac 544
Query: 364 acatactcaagtgttttgtcttatacttctgctttcagaagatagggcctcccctgcatg 423
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 543 acatactcaagtgttttgtcttatacttctgctttcagacgatagggcctcccctgcatg 484
Query: 424 ggccacactgtgctctgtgtcgtgtgtgtgtgtgtgtgtgtgtgtgtgtccttccttttc 483
||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 483 ggccacactgtgctctgtgtc------gtgtgtgtgtgtgtgtgtgtgtccttccttttc 430
Query: 484 gggctcatgattttcatcattttctaggactcatgtgtccttaagtatccttccaaaacc 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 429 gggctcatgattttcatcattttctaggactcatgtgtccttaagtatccttccaaaaac 370
Query: 544 aaaacaaaataaaaaccaatagcccccatgctaccaaatgtctgaatgtgttattatttt 603
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaacaaaataaaaaccaagagcccccatgctaccaaatgtctgaatgtgttattatttt 310
Query: 604 aacttggtgtctttgtaaatgtatagttaagagaaaactaccggaggattgtgggttcta 663
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aacttggtgtctttgtaagtgtatagttaagagaaaactaccggaggattgtgggttcta 250
Query: 664 aatcca 669
||||||
Sbjct: 249 aatcca 244
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_g06.g1 MSMg01no493_g06.g1 CHROMAT_FILE:
MSMg01no493_g06.g1 PHD_FILE: MSMg01no493_g06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:54 2005
(246 letters)
>mm_chr16_89957244_89957889
Length = 646
Score = 460 bits (238), Expect = e-134
Identities = 244/246 (99%), Gaps = 1/246 (0%)
Strand = Plus / Plus
Query: 1 cacacctgaagctcatcagttacaatccatccttgggtgcaacagagaatgactacccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacacctgaagctcatcagttacaatccatccttgggtgcaacagagaatgactacccct 260
Query: 61 gtacaataatgaaatgaaggctactccagctaaccaccactccccagagggctcaccacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtacaataatgaaatgaaggctactccagctaaccaccactccccagagggctcaccacc 320
Query: 121 acccccactccacccatcccccccacctcacccatgccccccatcccacccccggccccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acccccactccacccatcccccccacctcacccatgccccccatcccacccccggccccc 380
Query: 181 aggtctgccccttataactccagatgcataaatatgatgcacaaatcacaccatactccc 240
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 381 aggtctgccccttataactccagatgcataaatacgatgcacaaatcacaccatac-ccc 439
Query: 241 cccccc 246
||||||
Sbjct: 440 cccccc 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
