Query= MSMg01no494_o14.b1 MSMg01no494_o14.b1 CHROMAT_FILE:
MSMg01no494_o14.b1 PHD_FILE: MSMg01no494_o14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:52 2005
(591 letters)
>mm_chr16_55827750_55828740
Length = 991
Score = 1079 bits (558), Expect = 0.0
Identities = 576/582 (98%)
Strand = Plus / Plus
Query: 10 ggaattccctatctgttcgagcaccctcatttaaactccttcacccaataattccaatgt 69
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 210 ggaattccctatctgttagagcaccctcatttaaattccttcacccaataattccaatgt 269
Query: 70 cacttacatgattcaggctgctgaaagaggaggcgtgtaataataagagaattcaaaaat 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cacttacatgattcaggctgctgaaagaggaggcgtgtaataataagagaattcaaaaat 329
Query: 130 agtctcagatgtaccttgtgtggttccttgggagagaatggaattggtttaaatgcctaa 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agtctcagatgtaccttgtgtggttccttgggagagaatggaattggtttaaatgcctaa 389
Query: 190 ccaacctacggttgtatttcatgacaactccatggccctattccatagcagcaacattac 249
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ccaacctatggttgtatttcatgacaactccatggccctattccatagcagcaacattac 449
Query: 250 tgtagaaacgtgtagacaagggtgacaggcatacttgttatttgtaaatggagctctgat 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tgtagaaacgtgtagacaagggtgacaggcatacttgttatttgtaaatggagctctgat 509
Query: 310 attcacagctacaatgagataagagcctaagttcatccagtaaaggggaaagagagctag 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 attcacagctacaatgagataagagcctaagttcatccagtaaaggggaaagagagctag 569
Query: 370 cagaaacccaaaactcgacaaataacaacaaaaagatagatgcaaagagataatctaggg 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 cagaaacccaaaactcgacaaataacaacaaaaagatagatgcaaagagataatctaggg 629
Query: 430 gtaaccagaaaagcctggatttttagacagagacacatctagtttcttaggcacagtagc 489
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 630 gtaaccagaaaagcctggattttaagacagagacacatctagtttcttaggcacagtagc 689
Query: 490 tgaggaggacaccattgatcttagtcaggagaaggcacaaattgggaaaatgcaagcaga 549
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tgaggagggcaccactgatcttagtcaggagaaggcacaaattgggaaaatgcaagcaga 749
Query: 550 aacaaggccaatacttcatgctgagtctttttgatttgtgtc 591
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 aacaaggccaatacttcatgctgagtctttttgatttgtgtc 791
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_o14.g1 MSMg01no494_o14.g1 CHROMAT_FILE:
MSMg01no494_o14.g1 PHD_FILE: MSMg01no494_o14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:52 2005
(410 letters)
>mm_chr16_55997694_55998503
Length = 810
Score = 727 bits (376), Expect = 0.0
Identities = 401/416 (96%), Gaps = 13/416 (3%)
Strand = Plus / Minus
Query: 1 atgaggcactatactgaaactgtttcttacataactaaaacagaaaagcaaaagttcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 atgaggcactatactgaaactgtttcttacataactaaaacagaaaagcaaaagttcttc 400
Query: 61 ctatgtaaaatattaagtgatactcaatgcacatttcaaattttcaattctggtattaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ctatgtaaaatattaagtgatactcaatgcacatttcaaattttcaattctggtattaat 340
Query: 121 tataaaaaaatagacaaatacattgtttaaaagataatatatatggaaaccatacactta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tataaaaaaatagacaaatacattgtttaaaagataatatatatggaaaccatacactta 280
Query: 181 acatgcatatatacgcaaaacacagccaagggtatatgaaacactaaattaaacaatcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 acatgcatatatacgcaaaacacagccaagggtatatgaaacactaaattaaacaatcaa 220
Query: 241 aacaaatacagtaaaatataatcaaaacagaaaaaaaaataaaaataaaaataaaaacta 300
||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||
Sbjct: 219 aacaaatacagtaaaatataatcaaaacagaaaaaaaaa-----ataaa--taaaaaata 167
Query: 301 aaaagtcctagattataaagatgaaagggtaagactccagagagaattaaaacctaaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 aaaagtcctagattataaagatgaaagggtaagactccagagagaattaaaacctaaaca 107
Query: 361 cagcacaggaatatgtttttt------gttttgttttgtttttttaaagagtgaag 410
|||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 106 cagcacaggaatgtgtttttttgttttgttttgttttgtttttttaaagagtgaag 51
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
